Job Description P27306 Confidence 99.86% Date Thu Jan 5 11:43:55 GMT 2012 Rank 115 Aligned Residues 246 % Identity 21% Template d1qo8a2 SCOP info FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain Resolution 2.15

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.
Query SS confidence																																																		.	.	.
Query Sequence		P	H	S	Y	D	Y	D	A	I	V	I	G	S	G	P	G	G	E	G	A	A	M	G	L	V	K	Q	G	A	R	V	A	V	I	E	R	Y	Q	N	V	G	G	G	C	T	H	W	G	.	.	.	T	I	P	S	K	A	L	R	H	A	V	S	R	I	I	E	F	N	Q	N	P	L	Y	S	D	H	S	R	L
Query Conservation																																																		.	.	.
Alig confidence																																																		.	.	.
Template Conservation
Template Sequence		G	P	S	E	T	T	Q	V	L	V	V	G	A	G	S	A	G	F	N	A	S	L	A	A	K	K	A	G	A	N	V	I	L	V	D	K	A	P	F	S	G	G	N	S	M	I	S	A	G	G	M	N	A	V	G	T	K	Q	Q	T	A	H	G	V	E	D	K	V	E	W	F	I	E	D	A	M	K	G	G	R
Template Known Secondary structure				S											S														T								S	S	S	S	S		T	T	G	G	G			S					S	S							T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	S	S	F	A	D	I	L	N	H	A	D	N	V	I	N	Q	Q	T	R	M	R	Q	G	F	Y	E	R	N	H	C	E	I	L	Q	G	N	A	R	F	V	D	E	H	T	L	A	L	D	C	P	D	G	S	V	E	T	L	T	A	E	K	F	V	I	A	C	G	S	R	P	Y	H	P	T	D	V	D	F
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	Q	N	D	I	K	L	V	T	I	L	A	E	Q	S	A	D	G	V	Q	W	L	E	S	L	G	A	N	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T		S																						T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	H	P	R	I	Y	D	S	D	S	I	L	S	M	H	H	E	P	R	H	V	L	I	Y	G	A	G	V	I	G	C	E	Y	A	S	I	F	R	G	M	D	V	K	V	D	L	I	N	T	R	D	R	L	L	A	F	L	D	Q	E	M	S	D	S	L	S	Y	H	F	W	N	S	G	V	V	I	R	H	N	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	K	R	S	G	G	A	R	V	D	R	T	H	R	P	H	G	G	K	S	S	G	P	E	I	I	D	T	L	R	K	A	A	K	E	Q	G	I	D	T	R	L	N	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T		S	S							S	S	S	S																	T	T						S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																					227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		239	240	.	.	.	.	.	.	.	.							.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270																																				.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	Y	E	K	I	E	G	C	D	D	.	.	.	.	.	.	G	V	I	M	H	L	K	S	G	K	K	L	K	A	D	C	L	L	Y	A	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	G	N	T	D	S
Query Conservation												.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	V	V	K	L	V	V	N	D	D	H	S	V	V	G	A	V	V	H	G	K	H	T	G	Y	Y	M	I	G	A	K	S	V	V	L	A	T	G	G	Y	G	M	N	K	E	M	I	A	Y	Y	R	P	T	M	K	D	M	T	S	S	N	N	I	T	A	T	G	D	G	V	L	M	A	K	E	I	G	A	S	M
Template Known Secondary structure										T	T	S	B									T	T	T																		T	T										G	G	G	T	T					S		T	T		S										T	T	B
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.									.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.
Query Sequence		L	A	L	Q	N	I	G	L	E	T	D	S	R	G	Q	L	K	V	N	S	M	Y	Q	T	A	Q	P	H	V	Y	A	V	G	D	V	I	G	Y	.	.	.	.	.	.	.	.	P	S	L	A	S	A	A	Y	D	Q	G	R	I	A	A	Q	A	L	V
Query Conservation																																								.	.	.	.	.	.	.	.
Alig confidence										.	.																													.	.	.	.	.	.	.	.
Template Conservation										.	.
Template Sequence		T	D	I	D	W	V	Q	A	.	.	A	I	N	T	T	A	S	V	L	D	L	Q	S	K	P	I	D	G	L	F	A	A	G	E	V	T	G	G	V	H	G	Y	N	R	L	G	G	N	A	I	A	D	T	V	V	F	G	R	I	A	G	D	N	A	A
Template Known Secondary structure		S	S	T	T					.	.		B		T	T					B	T	T	S										S	T	T	S		S	S	S	T	T				T	T
Template Predicted Secondary structure										.	.
Template SS confidence
		352	.	.	.	.	.	.	.			360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions