 |
Job Description | P27306 | Confidence | 97.76% | Date | Thu Jan 5 11:43:55 GMT 2012 |
Rank | 311 | Aligned Residues | 116 |
% Identity | 16% | Template | d1fl2a2 |
SCOP info | FAD/NAD(P)-binding domain
| FAD/NAD(P)-binding domain
| FAD/NAD-linked reductases, N-terminal and central domains
|
Resolution | 1.90 |
|
 |
  |   |
151 | . | . | . | . | . | . | . | . | 160 | |
|
|
. | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|  |  |  |
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | H | P | T | D | V | D | F | T | H | . |
. |
. |
P | R | I | Y | D | S | D | S | I | L | S | M | H | H | E | P | R | H | V | L | I | Y | G | A | G | V | I | G | C | E | Y | A | S | I | F | R | G | M | D | V | K | V | D | L | I | N | T | R | D | R | L | L | A | F | L | D | Q | E | M | S | D | S | L | S | Y | H | F |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|
|
|   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |
|
|   |
|
|
|
|
|
|
|   |   |   |   |
|   |
|   |   |
|   |   |   |
|   |   |
|
|
|
|   |
|   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |
Template Sequence |   |
R | N | M | N | V | P | G | E | D | Q | Y | R | T | K | G | V | T | Y | C | P | H | C | D | G | P | L | F | K | G | K | R | V | A | V | I | G | G | G | N | S | G | V | E | A | A | I | D | L | A | G | I | V | E | H | V | T | L | L | E | F | A | P | E | M | K | A | D | . |
. |
. |
. |
. |
Q | V | L | Q | D | K | L | R |
Template Known Secondary structure |   |
|
|
|
|
| T | T | T | T | T | T | B | T | T | T |  |  | S |
|  |  |  |  | G | G | G | G | B | T |
|  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  | T | T | B | S |  |  |  |  |  |
| S | S | S | S |
|
| S |
| . | . | . | . | . |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
327 | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 400 | . |
  |
  |   |
228 | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | |
. | . | . | . | . | . | |
|
|
|
|
. | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . |
Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|  |  |  | . |  |  |
|
|
|
| . | . | . | . | . |
|  |  |  |
|
|  |  |  |  |  |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | N | S | G | V | V | I | R | H | N | E | E | Y | E | K | I | E | G | C | D | D | G | V | I | . |
M | H | L | K | S | G | . |
. |
. |
. |
. |
K | K | L | K | A | D | C | L | L | Y | A | N | G | R |
Query Conservation |   |
  |   |   |
|
|   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   | . |
|   |   |   |   |
| . | . | . | . | . |   |   |   |   |   |
|   |
|
|   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |
|   |   |
|
|
|   |
Template Sequence |   |
S | L | K | N | V | D | I | I | L | N | A | Q | T | T | E | V | K | G | D | G | S | K | V | V | G | L | E | Y | R | D | R | V | S | G | D | I | H | N | I | E | L | A | G | I | F | V | Q | I | G | L |
Template Known Secondary structure |   |
T |
| T | T |  |  |  |  | S | S |  |  |  |  |  |  |  |  | S | S | S | S |  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  |
| S |  |  |  |  |
| S |
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
402 | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|