Job Description P27306 Confidence 100.00% Date Thu Jan 5 11:43:55 GMT 2012 Rank 24 Aligned Residues 447 % Identity 24% Template c3l8kB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:dihydrolipoyl dehydrogenase; PDBTitle: crystal structure of a dihydrolipoyl dehydrogenase from2 sulfolobus solfataricus Resolution 2.50 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	D	Y	D	A	I	V	I	G	S	G	P	G	G	E	G	A	A	M	G	L	V	K	Q	G	A	R	V	A	V	I	E	R	Y	Q	N	V	G	G	G	C	T	H	W	G	T	I	P	S	K	A	L	R	H	A	V	S	R	I	I	E	F	N	Q	N	P	L	Y	S	D	H	S	R	L	L	R	S	S	F
Query Conservation
Alig confidence																																																																				.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.
Template Sequence		S	L	K	Y	D	V	V	V	I	G	A	G	G	A	G	Y	H	G	A	F	R	L	A	K	A	K	Y	N	V	L	M	A	D	P	K	G	E	L	G	G	N	C	L	Y	S	G	C	V	P	S	K	T	V	R	E	V	I	Q	T	A	W	R	L	T	N	I	.	.	.	.	.	.	.	.	A	I	P	L	D	F
Template Known Secondary structure													S													T	T								T	T	S	S	S	S							S																					.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.									.	.	.	.	70	.
		84	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		A	D	I	L	N	H	A	D	N	V	I	N	.	Q	Q	T	R	M	R	Q	G	F	Y	E	R	N	H	C	E	I	L	Q	G	N	A	R	F	V	D	E	H	T	L	A	L	D	C	P	D	G	S	V	E	T	L	T	A	E	K	F	V	I	A	C	G	S	R	P	Y	H	P	T	D	V	D	F	T	H	P	R
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		S	T	V	Q	D	R	K	D	Y	V	Q	E	L	R	F	K	Q	H	K	R	N	M	S	Q	Y	E	T	L	T	F	Y	K	G	Y	V	K	I	K	D	P	T	H	V	I	V	K	T	D	E	G	K	E	I	E	A	E	T	R	Y	M	I	I	A	S	G	A	E	T	A	K	L	R	L	P	G	V	E	Y	C	L
Template Known Secondary structure																								T	T		T	T						S							T	T							T	T																									T	T	G	G	G		B
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		163	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.																																																	.
Query SS confidence				.	.																																																	.
Query Sequence		I	Y	.	.	D	S	D	S	I	L	S	M	H	H	E	P	R	H	V	L	I	Y	G	A	G	V	I	G	C	E	Y	A	S	I	F	R	G	M	D	V	K	V	D	L	I	N	T	R	D	R	L	L	.	A	F	L	D	Q	E	M	S	D	S	L	S	Y	H	F	W	N	S	G	V	V	I	R	H	N	E	E
Query Conservation				.	.																																																	.
Alig confidence				.	.																																																	.
Template Conservation
Template Sequence		T	S	D	D	I	F	G	Y	K	T	S	F	R	K	L	P	Q	D	M	V	I	I	G	A	G	Y	I	G	L	E	I	A	S	I	F	R	L	M	G	V	Q	T	H	I	I	E	M	L	D	R	A	L	I	T	L	E	D	Q	D	I	V	N	T	L	L	S	I	L	K	L	N	I	K	F	N	S	P	V	T	E
Template Known Secondary structure								S	T	T		S			S			S								S													T	T								S	S	S	S	S		T	T	S																				S
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.			.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		Y	E	K	I	E	G	C	D	D	G	V	I	M	H	L	K	S	G	.	.	K	K	L	K	A	D	C	L	L	Y	A	N	G	R	T	G	N	T	D	S	L	A	L	Q	N	I	G	L	E	T	D	S	R	G	Q	L	K	V	N	S	M	Y	Q	T	A	Q	P	H	V	Y	A	V	G	D	V	I	G	Y	P	S
Query Conservation																				.	.
Alig confidence																				.	.																											.	.
Template Conservation																																																.	.
Template Sequence		V	K	K	I	K	D	D	E	Y	E	V	I	Y	S	T	K	D	G	S	K	K	S	I	F	T	N	S	V	V	L	A	A	G	R	R	P	V	I	P	E	G	A	R	E	I	G	.	.	L	S	I	S	K	T	G	I	V	V	D	E	T	M	K	T	N	I	P	N	V	F	A	T	G	D	A	N	G	L	A	P
Template Known Secondary structure							T	T									S	S	S								S														T	T	T	T	T	T	T	.	.			B		S	S	S	B				T	T		B		S	S	T	T					G	G	G	T		S	S
Template Predicted Secondary structure																																																.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280			.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340			.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		L	A	S	A	A	Y	D	Q	G	R	I	A	A	Q	A	L	V	K	G	E	A	T	A	.	.	H	L	I	E	D	I	P	T	G	I	Y	T	I	P	E	I	S	S	V	G	K	T	E	Q	Q	L	T	A	M	K	V	P	Y	E	V	G	R	A	Q	F	K	H	L	A	R	A	Q	I	V	G	M	N	V	G	T
Query Conservation																									.	.
Alig confidence																									.	.
Template Conservation
Template Sequence		Y	Y	H	A	A	V	R	M	S	I	A	A	A	N	N	I	M	A	N	G	M	P	V	D	Y	V	D	V	K	S	I	P	V	T	I	Y	T	I	P	S	L	S	Y	V	G	I	L	P	S	K	A	R	K	M	G	I	E	I	V	E	A	E	Y	N	M	E	E	D	V	S	A	Q	I	Y	G	Q	K	E	G	V
Template Known Secondary structure		S																	T	T	T								G	G	G	S						S	S	S																T										G	G	G								T
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	I	L	F	H	R	E	T	K	E	I	L	G	I	H	C	F	G	E	R	A	A	E	I	I	H	I	G	Q	A	I	M	E	Q	K	G	G	G	N	T	I	E	Y	F	V	N	T	T	F	N	Y	P	T	M	A	E	A	Y	R	V	A	A	L	N	G	L	N
Query Conservation
Alig confidence																																						.	.	.
Template Conservation																																						.	.	.
Template Sequence		L	K	L	I	F	E	R	G	S	M	R	L	I	G	A	W	M	I	G	V	H	S	Q	Y	L	I	N	E	L	G	L	A	V	A	Y	G	.	.	.	L	N	A	K	Q	L	A	S	F	A	E	Q	H	P	S	T	N	E	I	I	S	Y	T	A	R	K	V	I	E
Template Known Secondary structure								T	T	T		B									T	T															T	.	.	.		B							S				T	T	S	T	T
Template Predicted Secondary structure																																						.	.	.
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.				.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.