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Job DescriptionP27306
Confidence100.00%DateThu Jan 5 11:43:55 GMT 2012
Rank44Aligned Residues383
% Identity20%Templatec3fg2P_
PDB info PDB header:oxidoreductaseChain: P: PDB Molecule:putative rubredoxin reductase; PDBTitle: crystal structure of ferredoxin reductase for the cyp199a2 system from2 rhodopseudomonas palustris
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30. ........40.........50.........60.........70.........80...
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Query Sequence  DYDAIVIGSGPGGEGAAMGLVKQGAR. . VAVIERYQNVGGGCTHWGTIPSKALRHAVSRIIEFNQNPLYSDHSRLLRSSF
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Template Sequence  NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQR. . . . PPLSKAYLKSGGDP. . . . . . . . . . . . . . . . . . . .
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STT

S


SSSSSB
S....GGGGTGGGGS


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   1........10.........20.........30.........40.. .......50......
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  ADILNHADNVINQQTRMRQGFYERNHCEILQGNARFVDEHTLALDCPDGSVETLTAEKFVIACGSRPYHPTDVDFTHPRI
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Template Sequence  . . . . . . . . . . . NSLMFRPEKFFQDQAIELISDRMVSIDREGRKLLLASGT. . AIEYGHLVLATGARNRMLDVPNASLPDV
Template Known Secondary structure  ...........TSSBSS
TT


TTTTSSS
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STTTTSTT
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   57..60.........70.........80.........90..... ....100.........110.........120...
 
   164.....170..... ....180.........190.........200.........210.. .......220.........230......
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Query Sequence  YDSDSILSMHHE. . . . . . PRHVLIYGAGVIGCEYASIFRGMDVKVDLINTRDRLL. AFLDQEMSDSLSYHFWNSGVVIRH
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Template Sequence  LYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHY
Template Known Secondary structure 

SSGGG
S

STT

SSSSTTTTTS
TT

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   124.....130.........140.........150.........160.........170.........180.........190.........200...
 
   237..240.........250. ........260.........270.........280.........290.........300.........310....
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Query Sequence  NEEYEKIEGCDDGVI. MHLKSGKKLKADCLLYANGRTGNTDSLALQNIGLETDSRGQLKVNSMYQTAQPHVYAVGDVIG.
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Template Sequence  GVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIPNVEIAAAAGL. . . . PTAAGIIVDQQLLTSDPHISAIGDCALF
Template Known Secondary structure  S

TTTTS

S




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   204.....210.........220.........230.........240.........250. ........260.........270.........
 
   315....320.........330.........340.........350.........360.........370.........380.....
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Query Sequence  . . . . . . . . . YPSLASAAYDQGRIAAQALVKGEATAHLIEDIPTGIYTIPEISSVGKTEQQLTAMKVPYEVGRAQFKHLAR
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Template Sequence  ESVRFGETMRVESVQNATDQARCVAARLTGDA. KPYDGYPWFWSDQGDDKLQIVGLTAGF. . . . . . . . . . . . . . . . DQVV
Template Known Secondary structure  TTTT


STTT

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   280.........290.........300.........310. ........320.........330........ .340..
 
   386...390.........400.........410.........420.........430.........440.........450........
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Query Sequence  AQIVGMNVGTLKILFHRETKEILGIHCFGERAAEIIHIGQAIMEQKGGGNTIEYFVNTTFNYPTMAEAYRVAA
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Template Sequence  IRGSVAERSFSAFCY. . KAGKLIGIESVNRAADHVFGRKILPLDKS. . . VTPEQAADLSFD. . . . . . . LKKAA
Template Known Secondary structure  TTTT..TTS
TTTT

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   343......350....... ..360.........370.........380...... ...390........ .400...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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