Job Description P27306 Confidence 100.00% Date Thu Jan 5 11:43:55 GMT 2012 Rank 27 Aligned Residues 454 % Identity 29% Template c2nvkX_ PDB info PDB header:oxidoreductase Chain: X: PDB Molecule:thioredoxin reductase; PDBTitle: crystal structure of thioredoxin reductase from drosophila2 melanogaster Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.										50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.																										.
Query SS confidence																																															.	.	.	.	.	.	.	.	.																										.
Query Sequence		Y	D	Y	D	A	I	V	I	G	S	G	P	G	G	E	G	A	A	M	G	L	V	K	Q	G	A	R	V	A	V	I	E	R	Y	Q	N	V	G	G	G	C	T	H	W	G	.	.	.	.	.	.	.	.	.	T	I	P	S	K	A	L	R	H	A	V	S	R	I	I	E	F	N	Q	N	P	L	Y	S	D	.
Query Conservation																																															.	.	.	.	.	.	.	.	.																										.
Alig confidence																																															.	.	.	.	.	.	.	.	.																										.
Template Conservation
Template Sequence		Y	D	Y	D	L	I	V	I	G	G	G	S	A	G	L	A	C	A	K	E	A	V	L	N	G	A	R	V	A	C	L	D	F	V	K	P	T	P	T	L	G	T	K	W	G	V	G	G	T	C	V	N	V	G	C	I	P	K	K	L	M	H	Q	A	S	L	L	G	E	A	V	H	E	A	A	A	Y	G	W	N
Template Known Secondary structure					S							S													T	T													T	T	T						S	S							S																					G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	S	R	L	L	R	S	S	F	A	D	I	L	N	H	A	D	N	V	I	N	Q	Q	T	R	M	R	Q	G	F	Y	E	R	N	H	C	E	I	L	Q	G	N	A	R	F	V	D	E	H	T	L	A	L	D	C	P	D	G	S	V	E	T	L	T	A	E	K	F	V	I	A	C	G	S	R	P	Y	H	P	T
Query Conservation
Alig confidence																																																											.
Template Conservation																																																											.
Template Sequence		V	D	D	K	I	K	P	D	W	H	K	L	V	Q	S	V	Q	N	H	I	K	S	V	N	W	V	T	R	V	D	L	R	D	K	K	V	E	Y	I	N	G	L	G	S	F	V	D	S	H	T	L	L	A	K	L	K	S	.	G	E	R	T	I	T	A	Q	T	F	V	I	A	V	G	G	R	P	R	Y	P	D
Template Known Secondary structure				S																															T	T													T	T							T	T	.	S							S														S
Template Predicted Secondary structure																																																											.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	D	F	T	H	P	R	I	Y	D	S	D	S	I	L	S	M	H	H	E	P	R	H	V	L	I	Y	G	A	G	V	I	G	C	E	Y	A	S	I	F	R	G	M	D	V	K	V	D	L	I	N	T	R	D	R	L	L	A	F	L	D	Q	E	M	S	D	S	L	S	Y	H	F	W	N	S	G	V	V	I
Query Conservation
Alig confidence							.																																																			.
Template Conservation							.																																																			.
Template Sequence		I	P	G	A	V	.	E	Y	G	I	T	S	D	D	L	F	S	L	D	R	E	P	G	K	T	L	V	V	G	A	G	Y	I	G	L	E	C	A	G	F	L	K	G	L	G	Y	E	P	T	V	M	V	R	S	I	V	.	L	R	G	F	D	Q	Q	M	A	E	L	V	A	A	S	M	E	E	R	G	I	P	F
Template Known Secondary structure		S	T	T			.				B						T	T		S	S											S													T	T								S	S		S	.	S	T	T	S															T	T
Template Predicted Secondary structure							.																																																			.
Template SS confidence
		167	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.							.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.
Query Sequence		R	H	N	E	E	Y	E	K	I	E	G	C	D	D	G	V	I	M	.	.	.	.	.	.	H	L	K	S	G	K	K	L	K	A	D	C	L	L	Y	A	N	G	R	T	G	N	T	D	S	L	A	L	Q	N	I	G	L	E	T	D	S	R	G	Q	L	K	V	N	S	M	Y	Q	T	A	Q	P	H	V	Y	A
Query Conservation																				.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.																																			.
Template Conservation																																																												.
Template Sequence		L	R	K	T	V	P	L	S	V	E	K	Q	D	D	G	K	L	L	V	K	Y	K	N	V	E	T	G	E	E	S	E	D	V	Y	D	T	V	L	W	A	I	G	R	K	G	L	V	D	D	L	N	L	P	N	A	G	V	T	.	V	Q	K	D	K	I	P	V	D	S	Q	E	A	T	N	V	A	N	I	Y	A
Template Known Secondary structure			T	T										T	T	S									S	S	S									S											T	T	G	G	G		G	G	G	T	T			.		S	S	S	S	B				T	T	S	B		S	S	T	T
Template Predicted Secondary structure																																																												.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		309	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		V	G	D	V	I	.	G	Y	P	S	L	A	S	A	A	Y	D	Q	G	R	I	A	A	Q	A	L	V	K	G	E	A	T	A	H	L	I	E	D	I	P	T	G	I	Y	T	I	P	E	I	S	S	V	G	K	T	E	Q	Q	L	T	A	M	K	V	P	Y	E	V	G	R	A	Q	F	K	H	L	A	R	A	Q
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		V	G	D	I	I	Y	G	K	P	E	L	T	P	V	A	V	L	A	G	R	L	L	A	R	R	L	Y	G	G	S	T	Q	R	M	D	Y	K	D	V	A	T	T	V	F	T	P	L	E	Y	A	C	V	G	L	S	E	E	D	A	V	K	Q	F	G	A	D	E	I	E	V	F	H	G	Y	Y	K	P	T	E	F
Template Known Secondary structure			S	T	T	B	T	T	S																				S									S	S							S	S	S																		G	G	G											G	G	G
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		388	.				390	.	.	.	.	.	.	.	.	.	400	.	.	.	.		.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure				.	.	.																.
Query SS confidence				.	.	.																.
Query Sequence		I	V	.	.	.	G	M	N	V	G	T	L	K	I	L	F	H	R	E	T	.	K	E	I	L	G	I	H	C	F	G	E	R	A	A	E	I	I	H	I	G	Q	A	I	M	E	Q	K	G	G	G	N	T	I	E	Y	F	V	N	T	T	F	N	Y	P	T	M	A	E	A	Y	R	V	A	A	L	N	G	L	N
Query Conservation				.	.	.																.
Alig confidence				.	.	.																.																												.	.	.
Template Conservation																																																		.	.	.
Template Sequence		F	I	P	Q	K	S	V	R	Y	C	Y	L	K	A	V	A	E	R	H	G	D	Q	R	V	Y	G	L	H	Y	I	G	P	V	A	G	E	V	I	Q	G	F	A	A	A	L	K	S	G	.	.	.	L	T	I	N	T	L	I	N	T	V	G	I	H	P	T	T	A	E	E	F	T	R	L	A	I	T	K	R	S
Template Known Secondary structure		T	T	T	T				T	T									S	S	T	T		B									T	T														T	T	.	.	.		B							S				S	S		S	G	G	G	G	G	G				B	T	T	T
Template Predicted Secondary structure																																																		.	.	.
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.				.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
		464	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		481	.