Job Description P27306 Confidence 99.40% Date Thu Jan 5 11:43:55 GMT 2012 Rank 197 Aligned Residues 258 % Identity 16% Template c2jb1B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:l-amino acid oxidase; PDBTitle: the l-amino acid oxidase from rhodococcus opacus in complex2 with l-alanine Resolution 1.55 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	H	S	Y	D	Y	D	A	I	V	I	G	S	G	P	G	G	E	G	A	A	M	G	L	V	K	Q	G	A	R	V	A	V	I	E	R	Y	Q	N	V	G	G	G	C	T	H	W	G	T	I	P	S	K	A	L	R	H	A	V	S	R	I	I	E	F	N	Q	N	P	L	Y	S	D	H	S	R	L	L	R
Query Conservation
Alig confidence						.	.	.	.
Template Conservation						.	.	.	.
Template Sequence		G	S	H	S	.	.	.	.	V	V	V	L	G	G	G	P	A	G	L	C	S	A	F	E	L	Q	K	A	G	Y	K	V	T	V	L	E	A	R	T	R	P	G	G	R	V	W	T	A	R	G	G	S	E	E	T	D	L	S	G	E	T	Q	K	C	T	F	S	E	G	H	F	Y	N	V	G	A	T	R	I	P
Template Known Secondary structure		S				.	.	.	.							S													T	T								S	S	S	S	S		T	T						T	T						T	T	S									T	T					S	S
Template Predicted Secondary structure						.	.	.	.
Template SS confidence
		11	.	.	.					.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		S	S	F	A	D	I	L	N	H	A	D	N	V	I	N	Q	Q	T	R	M	R	Q	G	F	Y	E	R	N	H	C	E	I	L	Q	G	N	A	R	F	V	D	E	H	T	L	A	L	D	C	P	D	G	S	V	E	T	L	T	A	E	K	F	V	I	A	C	G	S	R	P	Y	H	P	T	D	V	D	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence								.	.	.	.	.																																																																			.	.	.
Template Conservation								.	.	.	.	.
Template Sequence		Q	S	H	I	T	L	.	.	.	.	.	D	Y	C	R	E	L	G	V	E	I	Q	G	F	G	N	Q	N	A	N	T	F	V	N	Y	Q	S	D	T	S	L	S	G	Q	S	V	T	Y	R	A	A	K	A	D	T	F	G	Y	M	S	E	L	L	K	K	A	T	D	Q	G	A	L	D	Q	V	L	S	R	E	D
Template Known Secondary structure		T	T					.	.	.	.	.							T											T	T	S							S	S	T	T	T	T																										T	T	T	T	T	T	T
Template Predicted Secondary structure								.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.						.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
																					158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	T	H	P	R	I	Y	D	S	D	S	I	L	S	M	H	H	E	P	R	H	V	L	I	Y	G	A	G	V	I	G	C	E	Y	A	S	I	F	R	G	M	D	V	K	V	D	L	I	N	T	R	D	R	L	L	A	F	L	D	Q	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	D	A	L	S	E	F	L	S	D	F	G	D	L	S	D	D	G	R	Y	L	G	S	S	R	R	G	Y	D	S	E	P	G	A	G	L	N	F	G	T	E	K	K	P	F	A	M	Q	E	V	I	R	S	G	I	G	R	N	F	S	F	D	F	G	Y	D	Q	A	M	M	M	F	T	P	V	G	G	M	D	R
Template Known Secondary structure														T			T	T	S						G	G	G								S	T	T																		T	T	T	T	T	G	G	G	G	G		T	T	T	S	S	S					T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.				.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.
Query SS confidence																																										.	.	.
Query Sequence		M	S	D	S	L	S	Y	H	F	W	N	S	G	V	V	I	R	H	N	E	E	Y	E	K	I	E	G	C	D	D	G	V	I	M	H	L	K	S	G	K	.	.	.	K	L	K	A	D	C	L	L	Y	A	N
Query Conservation																																										.	.	.
Alig confidence													.	.																												.	.	.
Template Conservation													.	.
Template Sequence		I	Y	Y	A	F	Q	D	R	I	G	T	.	.	D	N	I	V	F	G	A	E	V	T	S	M	K	N	V	S	E	G	V	T	V	E	Y	T	A	G	G	S	K	K	S	I	T	A	D	Y	A	I	C	T	I
Template Known Secondary structure												G	.	.	G	G			S	S										T	T									T	T								S						S
Template Predicted Secondary structure													.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.			.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions