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Job DescriptionP27306
Confidence99.73%DateThu Jan 5 11:43:55 GMT 2012
Rank145Aligned Residues253
% Identity25%Templatec2e5vA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:l-aspartate oxidase; PDBTitle: crystal structure of l-aspartate oxidase from2 hyperthermophilic archaeon sulfolobus tokodaii
Resolution2.09 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.........80........
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Query Sequence  AIVIGSGPGGEGAAMGLVKQGARVAVIERYQNVGGGCTHWGTIPSKALRHAVSRIIEFNQNPLYSDHSRLLRSSFADILN
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Template Sequence  IYIIGSGIAGLSAGVALRRAGKKVTLISKRIDGGSTPIAKGGVAASV. . GSDDSPELHAQDTIRVGDGLCDVKTVNYVTS
Template Known Secondary structure 

STT


SSTT
SSGGG

S



..STT

TT
S
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   2.......10.........20.........30.........40........ .50.........60.........70.........
 
   8990.........100.........110.........120.........130.........140.........150.........160........
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Query Sequence  HADNVINQQTRMRQGFYERNHCEILQGNARFVDEHTLALDCPDGSVETLTAEKFVIACGSRPYHPTDVDFTHPRIYDSDS
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Template Sequence  EAKNVIETFESWGFEFEEDLRLEGGH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT



SS
B

TT
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   80.........90.........100.....
 
   169170.........180.........190.........200.........210.........220.........230.........240........
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Query Sequence  ILSMHHEPRHVLIYGAGVIGCEYASIFRGMDVKVDLINTRDRLLAFLDQEMSDSLSYHFWNSGVVIRHNEEYEKIEGCDD
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLVEIRVKDGK
Template Known Secondary structure  ...................................SS


SSS
TT




TT
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   106...110.........120.........130.........140.........150
 
   249250. ........260.........270
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Query Sequence  GVI. MHLKSGKKLKADCLLYANG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  VTGFVTEKRGLVEDVDKLVLATGGYSYLYEYSSTQSTNIGDGMAIAFKAGTILADMEFVQFHPTVTSLDGEVFLLTETLR
Template Known Secondary structure  TTT


S




GGGSSSBSS
TT
S
TT


TT

GGG



T
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   151........160.........170.........180.........190.........200.........210.........220.........230
 
   271........280.
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RTGNTDSLALQ
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Template Sequence  GEGAQIINENGERFLFNYDKRGELAPRDILSRAIYIEMLKGHKVFIDLSKIEDFERKFPVVAKYLARHGHNYKVK. . . IP
Template Known Secondary structure  TT
TT


GGGGT
TTGGGS
T


TT
TT
TT

TTS
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   231........240.........250.........260.........270.........280.........290.........300..... ..
 
   282.......290.........300.........310... ......320.........330.........340.........350.....
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Query Sequence  NIGLETDSRGQLKVNSMYQTAQPHVYAVGDVI. . . . . GYPSLASAAYDQGRIAAQALVKGEATAHLIEDIPTGIYTIPE
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Template Sequence  IFPAAHFVDGGIRVNIRGESNIVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGINLPRYVDSSWEGISTDDGIVHSVR
Template Known Secondary structure 
S


TT
B
SSBT
GGG
SSSTTS

TTGGGTTTS






TT
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   308.310.........320.........330.........340.........350.........360.........370.........380......
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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