Job Description P27306 Confidence 99.65% Date Thu Jan 5 11:43:55 GMT 2012 Rank 166 Aligned Residues 258 % Identity 15% Template c2b9yA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:putative aminooxidase; PDBTitle: crystal structure of cla-producing fatty acid isomerase2 from p. acnes Resolution 2.21 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		P	H	S	Y	D	Y	D	A	I	V	I	G	S	G	P	G	G	E	G	A	A	M	G	L	V	K	Q	G	A	.	R	V	A	V	I	E	R	Y	Q	N	V	G	G	G	C	T	H	W	G	T	I	P	S	K	A	L	R	H	A	V	S	R	I	I	E	F	N	Q	N	P	L	Y	S	D	H	S	R	L	L	R
Query Conservation																															.
Alig confidence																															.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	I	S	K	D	S	R	I	A	I	I	G	A	G	P	A	G	L	A	A	G	M	Y	L	E	Q	A	G	F	H	D	Y	T	I	L	E	R	T	D	H	V	G	G	K	C	H	S	P	N	Y	H	G	R	R	Y	E	M	G	A	I	M	G	V	P	S	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					T	T									S													T	T									S	S	S		S	S	T	T							T	T					S	S						T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	F	A	D	I	L	N	H	A	D	N	V	I	N	Q	Q	T	R	M	R	Q	G	F	Y	E	R	N	H	C	E	I	L	Q	G	N	A	R	F	V	D	E	H	T	L	A	L	D	C	P	D	G	S	V	E	T	L	T	A	E	K	F	V	I	A	C	G	S	R	P	Y	H	P	T	D	V	D	F	T	H
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	D	T	I	Q	E	I	M	D	R	T	G	D	K	V	D	G	P	K	L	R	R	E	F	L	H	E	D	G	E	I	Y	V	P	E	K	D	P	V	R	G	P	Q	V	M	A	A	V	Q	K	L	G	Q	L	L	A	T	K	Y	Q	G	Y	D	A	N	G	H	Y	N	K	V	H	E	D
Template Known Secondary structure		.	.	.	.	.	.	.																										T	T	S					G	G	G		T	T																		T	T	T	T	T	T	T	S	S	S	S	S	S				G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.							.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.
Query Sequence		P	R	I	Y	D	S	D	S	I	L	S	M	H	H	E	P	R	H	.	.	.	.	.	.	V	L	I	Y	G	A	G	V	I	G	C	E	Y	A	S	I	F	R	G	M	D	V	K	V	D	L	I	N	T	R	D	R	L	L	A	F	L	D	Q	E	M	S	D	S	L	S	Y	H	F	W	N	S	G	V	V	I
Query Conservation																				.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.
Template Conservation
Template Sequence		L	M	L	P	F	D	E	F	L	A	L	N	G	C	E	A	A	R	D	L	W	I	N	P	F	T	A	F	G	Y	G	H	F	D	N	V	P	A	A	Y	V	L	K	Y	L	D	F	V	T	M	M	S	F	A	K	G	D	L	W	T	W	A	D	G	T	Q	A	M	F	E	H	L	N	A	T	L	E	H	P	A
Template Known Secondary structure		G	G	S	B								T	T		G	G	G						T	T	T								T	T	T	S	B								S											T						T	T													S	S	S
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	H	N	E	E	Y	E	K	I	E	G	C	D	D	G	V	I	M	H	L	K	S	G	K	K	L	K	A	D	C	L	L	Y	A	N	G	R	T	G	N	T	D	S	L	A	L	Q
Query Conservation
Alig confidence																						.
Template Conservation																						.
Template Sequence		E	R	N	V	D	I	T	R	I	T	R	E	D	G	K	V	H	I	H	T	.	T	D	W	D	R	E	S	D	V	L	V	L	T	V	P	L	E	K	F	L	D	Y	S	D	A	D
Template Known Secondary structure		B		S										T	T							.	S	S						S						S						G	G	G	B
Template Predicted Secondary structure																						.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions