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Job DescriptionP27306
Confidence99.83%DateThu Jan 5 11:43:55 GMT 2012
Rank120Aligned Residues316
% Identity16%Templatec1vqwB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:protein with similarity to flavin-containing PDBTitle: crystal structure of a protein with similarity to flavin-2 containing monooxygenases and to mammalian dimethylalanine3 monooxygenases
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20........ .30.........40.........50...
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Query Sequence  MPHSYDYDAIVIGSGPGGEGAAMGLVKQ. . GARVAVIERYQNVGGGCTHWGTIPS. . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  LPTI. . RKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVY
Template Known Secondary structure 

S
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STTS

S
SSSSSSGGGS

S


S


SSB

TT




B

SSS

B
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   3... ...10.........20.........30.........40.........50.........60.........70.........80
 
   54.....60.........70.........80.........90.........100.........110.........120.........
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Query Sequence  . . . . KALRHAVSRIIEFNQNPLYSDHSRLLRSSFADILNHADNVINQQTRMRQGFYERNHCEILQGNARFVDEHTLALDC
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Template Sequence  PSPLYRDLQTNTPIELXGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVT. . . . YKGTK
Template Known Secondary structure 




TT
B
SS
TTTSS
TTS


TT

SS
BGGGGGG
STT....SS
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   81........90.........100.........110.........120.........130.........140.........150. .....
 
   130.........140....... ..150......... 160.........170.........180.........190.........200
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Query Sequence  PDGSVETLTAEKFVIACG. . SRPYHPTDVDFT. . . . . . . HPRIYDSDSILSMHHEPRHVLIYGAGVIGCEYASIFRGMDV
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Template Sequence  AGSPISKDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELFVGESVLVVGGASSANDLVRHLTPVAK
Template Known Secondary structure  TT

S


SSSSB
B


BTSTTSGGG


GGGGTT



STTTS
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   157..160.........170.........180.........190.........200.........210.........220.........230......
 
   201........210.........220.........230.........240.........250.........260. ........270........
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Query Sequence  KVDLINTRDRLLAFLDQEMSDSLSYHFWNSGVVIRHNEEYEKIEGCDDGVIMHLKSGKKLK. ADCLLYANGRTGNTDSL.
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Template Sequence  HPIYQSLLGGGDIQ. . . . . . . . . . . . . . . . NESLQQVPEITKFDPTTRE. . IYLKGGKVLSNIDRVIYCTGYLYSVPFPS
Template Known Secondary structure  SSTT

S
B................
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TTTT..TTS


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   237..240.........250 .........260......... 270.........280.........290........
 
   279280.........290.........300.........310.........320.........330.........340.
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Query Sequence  . . . . . ALQNIGLETDSRGQLKVNSMYQTAQPHVYAVGDVIGYPSLASAAYDQGRIAAQALVKGEATAH
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Template Sequence  LAKLKSPETKLIDDGSHVHNVYQHIFYIPDPTLAFVGLALHVVP. FPTSQAQAAFLARVWSGRLKLPS
Template Known Secondary structure  S

STTT


SSSS


STTTTT
TT
S

BSS
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   299300.........310.........320.........330.........340.. .......350.........360.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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