Job Description P27306 Confidence 99.95% Date Thu Jan 5 11:43:55 GMT 2012 Rank 83 Aligned Residues 305 % Identity 18% Template c1vdcA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadph dependent thioredoxin reductase; PDBTitle: structure of nadph dependent thioredoxin reductase Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	S	Y	D	Y	D	A	I	V	I	G	S	G	P	G	G	E	G	A	A	M	G	L	V	K	Q	G	A	R	V	A	V	I	E	R	Y	Q	N	V	G	G	G	C	T	H	W	G	T	I	P	S	K	A	L	R	H	A	V	S	R	I	I	E	F	N	Q	N	P	L	Y	S	D	H	S	R	L	L	R	S	S
Query Conservation
Alig confidence																																													.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	T	H	N	T	R	L	C	I	V	G	S	G	P	A	A	H	T	A	A	I	Y	A	A	R	A	E	L	K	P	L	L	F	E	G	W	M	A	N	D	I	A	P	.	G	G	Q	L	T	T	T	T	D	V	E	N	F	P	G	F	P	E	G	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														S													T	T									S	S	B	T	T	B		T	.	T		G	G	G	G		S					S	T	T		T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																													.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	D	I	L	N	H	A	D	N	V	I	N	Q	Q	T	R	M	R	Q	G	F	Y	E	R	N	H	C	E	I	L	Q	G	N	A	R	F	V	D	E	H	T	L	A	L	D	C	P	D	G	S	V	E	T	L	T	A	E	K	F	V	I	A	C	G	S	R	P	Y	H	P	T	D	V	D	F	T	H	P	R
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	G	V	E	L	T	D	K	F	R	K	Q	S	E	R	F	G	T	T	I	F	T	E	T	V	T	K	V	D	F	S	S	K	P	F	K	L	F	T	D	S	K	A	I	L	A	D	A	V	I	L	A	I	G	A	V	A	K	R	L	S	F	V	G	S	G	E	V	L	G	G	F	W	N	R	G	I	S
Template Known Secondary structure		.	.	.															T	T														S	S	S	S						S	S																						B	T		S	S	S	S	S			B	T	T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	D	S	D	S	I	L	S	M	H	H	E	P	R	H	V	L	I	Y	G	A	G	V	I	G	C	E	Y	A	S	I	F	R	G	M	D	V	K	V	D	L	I	N	T	R	D	R	L	L	A	F	L	D	Q	E	M	S	D	S	L	S	Y	H	F	W	N	S	G	V	V	I	R	H	N	E	E	Y	E	K
Query Conservation
Alig confidence																																																							.	.	.	.	.
Template Conservation																																																							.	.	.	.	.
Template Sequence		A	C	A	V	C	D	G	A	A	P	I	F	R	N	K	P	L	A	V	I	G	G	G	D	S	A	M	E	E	A	N	F	L	T	K	Y	G	S	K	V	Y	I	I	H	R	R	D	A	F	R	A	S	K	.	.	.	.	.	I	M	Q	Q	R	A	L	S	N	P	K	I	D	V	I	W	N	S	S	V	V	E
Template Known Secondary structure		S						T	T	S	G	G	G	T	T	S								S											T	T	T	S	S							S	S	S	S			S			.	.	.	.	.								T		T	T						S
Template Predicted Secondary structure																																																							.	.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.						.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		243	.	.	.	.	.									.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300		.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.																																																					.
Query SS confidence								.	.	.	.	.	.	.	.																																																					.
Query Sequence		I	E	G	C	D	D	.	.	.	.	.	.	.	.	G	V	I	M	H	L	K	S	G	K	K	L	K	A	D	C	L	L	Y	A	N	G	R	T	G	N	T	D	S	L	A	L	Q	N	I	G	L	E	T	D	S	R	G	Q	L	K	V	N	S	M	Y	Q	.	T	A	Q	P	H	V	Y	A	V	G	D	V	I
Query Conservation								.	.	.	.	.	.	.	.																																																					.
Alig confidence								.	.	.	.	.	.	.	.																															.	.	.																				.
Template Conservation																																														.	.	.
Template Sequence		A	Y	G	D	G	E	R	D	V	L	G	G	L	K	V	K	N	V	V	T	G	D	V	S	D	L	K	V	S	G	L	F	F	A	I	G	H	E	P	A	T	K	F	L	.	.	.	D	G	G	V	E	L	D	S	D	G	Y	V	V	T	K	P	G	T	T	Q	T	S	V	P	G	V	F	A	A	G	D	V	Q
Template Known Secondary structure					S	S	S	S	S	S									T	T	T									S						S					S		G	G	G	.	.	.	T	T	S	S		B		T	T	S		B				T	T	S		B		S	S	T	T					G	G	G	G
Template Predicted Secondary structure																																														.	.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250				.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		314	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		G	Y	.	P	S	L	A	S	A	A	Y	D	Q	G	R	I	A	A	Q	A	L	V
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		D	K	K	Y	R	Q	A	I	T	A	A	G	T	G	C	M	A	A	L	D	A	E
Template Known Secondary structure			S	S
Template Predicted Secondary structure
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions