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Job DescriptionP27306
Confidence99.63%DateThu Jan 5 11:43:55 GMT 2012
Rank173Aligned Residues247
% Identity27%Templatec1qo8A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:flavocytochrome c3 fumarate reductase; PDBTitle: the structure of the open conformation of a flavocytochrome2 c3 fumarate reductase
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40......... 50.........60.........70.........
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Query Sequence  HSYDYDAIVIGSGPGGEGAAMGLVKQGARVAVIERYQNVGGGCTHWG. . . TIPSKALRHAVSRIIEFNQNPLYSDHSRLL
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Template Sequence  PSETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQ
Template Known Secondary structure 
S

ST


SSSSS
TTGGG

S

SS
TT



TTT
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   118.120.........130.........140.........150.........160.........170.........180.........190.......
 
   80.........90.........100.........110.........120.........130.........140.........150.........
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Query Sequence  RSSFADILNHADNVINQQTRMRQGFYERNHCEILQGNARFVDEHTLALDCPDGSVETLTAEKFVIACGSRPYHPTDVDFT
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Template Sequence  QNDIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 
S
TT





TT
SS
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   198.200.........210.........220.........230.......
 
   160.........170.........180.........190.........200.........210.........220.........230.........
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Query Sequence  HPRIYDSDSILSMHHEPRHVLIYGAGVIGCEYASIFRGMDVKVDLINTRDRLLAFLDQEMSDSLSYHFWNSGVVIRHNEE
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSR
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SSSS
TT


S
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   238.240.........250.........260.........270..
 
   240.........250.. .......260.........270
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Query Sequence  YEKIEGCDDGVIM. . . . . . HLKSGKKLKADCLLYANG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  VVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMNKEMIAYYRPTMKDMTSSNNITATGDGVLMAKEIGASMT
Template Known Secondary structure 
TTSBTTT




TT

GGGTT

S
TT
S
TTB
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   273......280.........290.........300.........310.........320.........330.........340.........350..
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  DIDWVQAHPTVGKDSRILISETVRGVGAVMVNKDGNRFISELTTRDKASDAILKQPGQFAWIIFDNQLYKKAKMVRGYDH
Template Known Secondary structure  STT
SSS
SB

TTT

TTS


S
TTS
TSGGG

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   353......360.........370.........380.........390.........400.........410.........420.........430..
 
   271........280.........290.........300
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RTGNTDSLALQNIGLETDSRGQLKVNSMYQ
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Template Sequence  LEMLYKGDTVEQLAKSTGMKVADLAKTVSDYNGYVASGKDTAFGRADMPLNMTQSPYYAVKVAPGIHHTMGGVAINTTAS
Template Known Secondary structure  TT

SSTT

S

TTT

S




S
SSS


B
TT
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   433......440.........450.........460.........470.........480.........490.........500.........510..
 
   301 ........310......... 320.........330....
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Query Sequence  T. . . . . . AQPHVYAVGDVIGYPSLA. . . . . . . . SAAYDQGRIAAQALV
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Template Sequence  VLDLQSKPIDGLFAAGEVTGGVHGYNRLGGNAIADTVVFGRIAGDNAA
Template Known Secondary structure  BTTS

STTB
SSSTT


TT
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   513......520.........530.........540.........550.........560
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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