Job Description P27306 Confidence 100.00% Date Thu Jan 5 11:43:55 GMT 2012 Rank 47 Aligned Residues 403 % Identity 15% Template c1q1wA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putidaredoxin reductase; PDBTitle: crystal structure of putidaredoxin reductase from2 pseudomonas putida Resolution 2.60 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		D	Y	D	A	I	V	I	G	S	G	P	G	G	E	G	A	A	M	G	L	V	K	Q	G	A	R	.	.	V	A	V	I	E	R	Y	Q	N	V	G	G	G	C	T	H	W	G	T	I	P	S	K	A	L	R	H	A	V	S	R	I	I	E	F	N	Q	N	P	L	Y	S	D	H	S	R	L	L	R	S	S	F
Query Conservation																												.	.
Alig confidence																												.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	D	N	V	V	I	V	G	T	G	L	A	G	V	E	V	A	F	G	L	R	A	S	G	W	E	G	N	I	R	L	V	G	D	A	T	V	I	P	H	H	L	P	P	L	S	K	A	Y	L	A	G	K	A	T	A	E	S	L	Y	L	R	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S									S													T	T			S							S			S			B		S	G	G	G	G	T	T	T	T	T	T		S		S	G	G	G	B	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	I	L	N	H	A	D	N	V	I	N	Q	Q	T	R	M	R	Q	G	F	Y	E	R	N	H	C	E	I	L	Q	G	N	A	R	F	V	D	E	H	T	L	A	L	D	C	P	D	G	S	V	E	T	L	T	A	E	K	F	V	I	A	C	G	S	R	P	Y	H	P	T	D	V	D	F	T	H	P	R	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	D	A	Y	A	A	Q	N	I	Q	L	L	G	G	T	Q	V	T	A	I	N	R	D	R	Q	Q	V	I	L	S	D	G	R	A	L	D	Y	D	R	L	V	L	A	T	G	G	R	P	R	P	L	P	V	A	S	G	A	V	G	K	A	N	N	F	R	Y	L	R	T	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.						T	T						S								T	T	T	T					T	T	S						S														G	G	G	T	T					S	T	T				S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		Y	D	S	D	S	I	L	S	M	H	H	E	P	R	H	V	L	I	Y	G	A	G	V	I	G	C	E	Y	A	S	I	F	R	G	M	D	V	K	V	D	L	I	N	T	R	D	R	L	L	.	A	F	L	D	Q	E	M	S	D	S	L	S	Y	H	F	W	N	S	G	V	V	I	R	H	N	E	E	Y	E	K
Query Conservation																																																			.
Alig confidence																																																			.
Template Conservation
Template Sequence		E	D	A	E	C	I	R	R	Q	L	I	A	D	N	R	L	V	V	I	G	G	G	Y	I	G	L	E	V	A	A	T	A	I	K	A	N	M	H	V	T	L	L	D	T	A	A	R	V	L	E	R	V	T	A	P	P	V	S	A	F	Y	E	H	L	H	R	E	A	G	V	D	I	R	T	G	T	Q	V	C	G
Template Known Secondary structure									T	T			T	T									S													T	T								S	S	S	S	T	T	T	T	T	S																T						S
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.				.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure														.	.	.																																																															.	.	.
Query SS confidence														.	.	.																																																															.	.	.
Query Sequence		I	E	G	C	D	D	G	V	I	M	H	L	.	.	.	K	S	G	K	K	L	K	A	D	C	L	L	Y	A	N	G	R	T	G	N	T	D	S	L	A	L	Q	N	I	G	L	E	T	D	S	R	G	Q	L	K	V	N	S	M	Y	Q	T	A	Q	P	H	V	Y	A	V	G	D	V	I	G	Y	P	.	.	.
Query Conservation														.	.	.																																																															.	.	.
Alig confidence														.	.	.																																.	.	.	.																												.	.	.
Template Conservation																																																.	.	.	.
Template Sequence		F	E	M	S	T	D	Q	Q	K	V	T	A	V	L	C	E	D	G	T	R	L	P	A	D	L	V	I	A	G	I	G	L	I	P	N	C	E	L	A	S	A	A	G	L	Q	V	.	.	.	.	D	N	G	I	V	I	N	E	H	M	Q	T	S	D	P	L	I	M	A	V	G	D	C	A	R	F	H	S	Q	L
Template Known Secondary structure						T	T	T									T	T	S						S																	T	T	T			B	.	.	.	.	S	S	S					T	T	S	B		S	S	T	T					G	G	G						T	T
Template Predicted Secondary structure																																																.	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.					.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
									317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	S	L	A	S	A	A	Y	D	Q	G	R	I	A	A	Q	A	L	V	K	G	E	A	T	A	H	L	I	E	D	I	P	T	G	I	Y	T	I	P	E	I	S	S	V	G	K	T	E	Q	Q	L	T	A	M	K	V	P	Y	E	V	G	R	A	Q	F	K	H	L	A	R	A	Q	I	V
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																							.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	D	R	W	V	R	I	E	S	V	P	N	A	L	E	Q	A	R	K	I	A	A	I	L	C	G	K	V	P	.	R	D	E	A	A	P	W	F	W	S	D	Q	Y	E	I	G	L	K	M	V	G	L	S	E	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	I	I	V	R	G	S
Template Known Secondary structure		T	T							S																T	T				.													T	T										T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																															.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.																	.	.	350	.	.	.	.	.
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	N	V	G	T	L	K	I	L	F	H	R	E	T	K	E	I	L	G	I	H	C	F	G	E	R	A	A	E	I	I	H	I	G	Q	A	I	M	E	Q	K	G	G	G	N	T	I	E	Y	F	V	N	T	T	F	N	Y	P	T	M	A	E	A	Y	R	V	A	A	L	N	G	L	N	R
Query Conservation
Alig confidence													.	.																														.	.	.									.	.	.
Template Conservation													.	.																														.	.	.									.	.	.
Template Sequence		L	A	Q	P	D	F	S	V	F	Y	L	.	.	Q	G	D	R	V	L	A	V	D	T	V	N	R	P	V	E	F	N	Q	S	K	Q	I	I	T	D	R	L	P	.	.	.	V	E	P	N	L	L	G	D	.	.	.	E	S	V	P	L	K	E	I	I	A	A	A	K	A	E	L	S	S	A
Template Known Secondary structure		T	T	S	S								.	.		T	T									S														T	T			.	.	.							S		.	.	.	T	T	S
Template Predicted Secondary structure													.	.																														.	.	.									.	.	.
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.			.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.				.	.	.	.	400	.	.	.				.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.