Job Description P37639 Confidence 66.83% Date Thu Jan 5 11:56:11 GMT 2012 Rank 334 Aligned Residues 72 % Identity 8% Template d1xsva_ SCOP info DNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors YlxM/p13-like Resolution 1.70

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.								.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.
Query Sequence		T	R	V	C	T	V	I	N	N	N	I	A	H	E	W	T	L	A	R	I	A	S	E	L	L	M	S	P	S	L	L	K	K	K	L	R	E	E	E	T	S	Y	S	Q	L	L	T	E	C	.	.	.	.	.	.	.	R	M	Q	R	A	L	Q	L	I	V	I	H	G	F	S	I	K	R	V	A	V	S	C
Query Conservation																																																			.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	K	Q	R	N	Y	L	E	L	F	Y	L	E	D	Y	S	L	S	E	I	A	D	T	F	N	V	S	R	Q	A	V	Y	D	N	I	R	R	T	G	D	L	V	E	D	Y	E	K	K	L	E	L	Y	Q	K	F	E	Q	R	R	E	I	Y	D	E	X	K	Q	H	L	S	N	P	E	Q	I	Q	R	Y	I
Template Known Secondary structure													T	S											T	T																																									T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions