Return to main results Retrieve Phyre Job Id

Job DescriptionP37639
Confidence99.51%DateThu Jan 5 11:56:11 GMT 2012
Rank10Aligned Residues59
% Identity22%Templated1bl0a2
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like AraC type transcriptional activator
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   194.....200.........210.........220.........230.........240.........250..
Predicted Secondary structure 


















Query SS confidence 


























































Query Sequence  RMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSNRDS
Query Conservation 

  
  

  
  

 


   

 
 
 
 
 


  
 

 



           
Alig confidence 


























































Template Conservation 

  
  

  
  

  

   

     
 
 

   
 

  

            
Template Sequence  KMTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYRMTNMQGESRFLH
Template Known Secondary structure 



TT
S
SS
T
SS

STT


Template Predicted Secondary structure 














Template SS confidence 


























































   64.....70.........80.........90.........100.........110.........120..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions