Job Description P37639 Confidence 90.48% Date Thu Jan 5 11:56:11 GMT 2012 Rank 92 Aligned Residues 76 % Identity 9% Template c3dpjB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:transcription regulator, tetr family; PDBTitle: the crystal structure of a tetr transcription regulator2 from silicibacter pomeroyi dss Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																																									.	.			.
Query SS confidence																																									.	.			.
Query Sequence		P	N	M	R	T	R	V	C	T	V	I	N	N	N	I	A	H	E	W	T	L	A	R	I	A	S	E	L	L	M	S	P	S	L	L	K	K	K	L	.	.	R	E	.	E	E	T	S	Y	S	Q	L	L	T	E	C	R	M	Q	R	A	L	Q	L	I	V	I	H	G	F	S	I	K	R	V	A	V	S	C
Query Conservation																																									.	.			.
Alig confidence																																									.	.			.
Template Conservation
Template Sequence		D	Q	I	V	A	A	A	D	E	L	F	Y	R	Q	G	F	A	Q	T	S	F	V	D	I	S	A	A	V	G	I	S	R	G	N	F	Y	Y	H	F	K	T	K	D	E	I	L	A	E	V	I	R	L	R	L	A	R	T	A	Q	X	L	A	D	W	Q	G	T	G	D	S	P	R	A	R	I	A	S	F	I
Template Known Secondary structure																	S	T	T											T								T	T		S																										T	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions