 |
Job Description | P37639 | Confidence | 81.75% | Date | Thu Jan 5 11:56:11 GMT 2012 |
Rank | 240 | Aligned Residues | 65 |
% Identity | 15% | Template | c2rekA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:putative tetr-family transcriptional regulator; |
PDBTitle: crystal structure of tetr-family transcriptional regulator
|
Resolution | 1.86 Å |
|
 |
  |   |
141 | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | |
|
180 | . | |
. | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  | . | . |  |  | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | N | M | R | T | R | V | C | T | V | I | N | N | N | I | A | H | E | W | T | L | A | R | I | A | S | E | L | L | M | S | P | S | L | L | K | K | K | L | . |
. |
R | E | . |
E | E | T | S | Y | S | Q | L | L | T | E | C | R | M | Q | R | A | L | Q | L | I | V | I | H | G |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |
|   |
| . | . |
|   | . |   |
|   |
|   |   |   |
|
|   |   |   |
|
|   |   |
|   |   |
|
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |
|
|   |   |
|   |   |   |   |
|   | . |   |   |
|
|   |   |
|
|   |   |
|
|
|
|   |   |
|   |
|   |   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
D | R | I | I | E | A | A | A | A | E | V | A | R | H | G | A | . |
D | A | S | L | E | E | I | A | R | R | A | G | V | G | S | A | T | L | H | R | H | F | P | S | R | W | G | L | L | Q | A | V | F | Q | E | R | V | A | Q | L | C | D | E | A | R | S | L | A | A | E | H | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | . | G |
|
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | |
. | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|