Return to main results Retrieve Phyre Job Id

Job DescriptionP77626
Confidence78.90%DateThu Jan 5 12:31:16 GMT 2012
Rank416Aligned Residues42
% Identity19%Templated2vkea1
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like Tetracyclin repressor-like, N-terminal domain
Resolution1.62

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40.........50.........60
Predicted Secondary structure 













Query SS confidence 









































Query Sequence  RGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN
Query Conservation   


   

   


 
 

 

 
   

   
  

 

 
Alig confidence 









































Template Conservation     
   

  



    
  
  
  
             
Template Sequence  DGLTTRKLAQKLGIEQPTLYWHVKNKRALLDALAVEILARHH
Template Known Secondary structure  GG

T





Template Predicted Secondary structure 









Template SS confidence 









































   23......30.........40.........50.........60....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions