 |
Job Description | P77626 | Confidence | 75.95% | Date | Thu Jan 5 12:31:16 GMT 2012 |
Rank | 463 | Aligned Residues | 72 |
% Identity | 13% | Template | c3ccyA_ |
PDB info |
PDB header:transcription regulator | Chain: A: PDB Molecule:putative tetr-family transcriptional regulator; |
PDBTitle: crystal structure of a tetr-family transcriptional regulator from2 bordetella parapertussis 12822
|
Resolution | 2.01 Å |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | |
|
. | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | N | L | A | R | F | L | S | T | T | L | K | Q | L | R | Q | Q | . |
. |
R | G | W | S | L | S | R | L | A | E | A | T | G | V | S | K | A | M | L | G | Q | I | E | R | N | E | S | S | P | T | V | A | T | L | W | K | I | A | T | G | L | N | V | P | F | S | T | F | I | S | P | P | Q | S | A |
Query Conservation |   |
  |   |   |   |   |   |
|
|   |
|
|
|   |
|
|   |   | . | . |   |
|
|
|   |   |   |
|
|   |   |   |
|
|
|   |
|   |
|
|   |
|
|   |
|   |   |   |
|
|   |   |   |
|   |   |
|
|   |
|
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|
|   |
|
|   |   |
|   |   |   |   |
|   |   |   |   |
|
|   |   |
|
|   |   |
|
|
|
|   |   |
|   |
|   |   |
|   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
N | I | R | D | T | I | I | E | R | A | A | A | X | F | A | R | Q | G | Y | S | E | T | S | I | G | D | I | A | R | A | C | E | C | S | K | S | R | L | Y | H | Y | F | D | S | K | E | A | V | L | R | D | X | L | T | T | H | V | D | S | L | L | E | R | C | R | Q | V | L | Y | G | S | N | E | P |
Template Known Secondary structure |   |
T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| T | T | T | S |
|  |  |  |  |  |  |  | T | T |
|
| G | G | G | G | T | T | T |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|