 |
Job Description | P77626 | Confidence | 96.74% | Date | Thu Jan 5 12:31:16 GMT 2012 |
Rank | 158 | Aligned Residues | 56 |
% Identity | 20% | Template | c3bd1B_ |
PDB info |
PDB header:transcription | Chain: B: PDB Molecule:cro protein; |
PDBTitle: structure of the cro protein from putative prophage element xfaso 1 in2 xylella fastidiosa strain ann-1
|
Resolution | 1.40 Å |
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | |
|
. | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | K | Q | L | R | Q | Q | R | G | W | S | L | S | R | L | A | E | A | T | G | V | S | K | A | M | L | G | Q | I | E | R | N | E | S | S | P | T | V | A | T | L | W | K | I | A | T | G | L | N | . |
. |
V | P | F | S | T | F | I | S | P |
Query Conservation |   |
|
|   |
|
|   |   |   |
|
|
|   |   |   |
|
|   |   |   |
|
|
|   |
|   |
|
|   |
|
|   |
|   |   |   |
|
|   |   |   |
|   |   |
|
|   |
|
|   | . | . |
|   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |   |
| . |   |
|   |   |
|
|   |   |
|
|
|
|   |   |
|
|   |   |
| . |   |   |   |   |   |
|
|   |   |   |   |   |   |
|
|   |   |
|   |
|   |
|
|   |   |
|
|
|
|
|
Template Sequence |   |
I | D | I | A | I | N | K | L | G | . |
S | V | S | A | L | A | A | S | L | G | V | R | Q | S | A | I | S | N | W | . |
R | A | R | G | R | V | P | A | E | R | C | I | D | I | E | R | V | T | N | G | A | V | I | C | R | E | L | R | P | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | S | . | S |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  | . |  |  |  | T |
|
|
| G | G | G |  |  |  |  |  |  |  | T | T | T | S | S |
|  |  |  |  |
| T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
| . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | . |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | |
. | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | |
. | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|