Job Description P77626 Confidence 99.35% Date Thu Jan 5 12:31:16 GMT 2012 Rank 76 Aligned Residues 140 % Identity 7% Template c2fjrB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:repressor protein ci; PDBTitle: crystal structure of bacteriophage 186 Resolution 1.95 Å

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		10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		T	T	L	K	Q	L	R	Q	Q	R	G	W	.	S	L	S	R	L	A	E	A	T	G	V	S	K	A	M	L	G	Q	I	E	R	N	E	S	S	P	T	V	A	T	L	W	K	I	A	T	G	L	N	V	P	F	S	T	F	I	S	P	P	Q	S	A	T	P	S	V	Y	D	P	Q	Q	Q	A	M	V	I	T
Query Conservation														.
Alig confidence														.																												.
Template Conservation																																										.
Template Sequence		D	V	L	D	R	I	C	E	A	Y	G	F	S	Q	K	I	Q	L	A	N	H	F	D	I	A	S	S	S	L	S	N	R	Y	T	R	G	A	I	S	Y	.	D	F	A	A	H	C	A	L	E	T	G	A	N	L	Q	W	L	L	T	G	E	G	E	A	F	V	N	N	R	E	S	S	D	A	K	R	I	E	G
Template Known Secondary structure												T		S		T					T	T	T	T												S	S	S				.																			S		S	S		S			T	T	T	T	S	S	S
Template Predicted Secondary structure																																										.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	F	P	Y	D	P	Q	L	C	F	E	H	F	S	I	Q	M	A	S	G	A	I	S	E	S	T	P	H	E	K	G	V	I	E	H	V	V	V	I	D	G	Q	L	D	L	C	V	D	G	E	W	Q	T	L	N	C	G	E	G	V	R	F	A
Query Conservation
Alig confidence																																															.	.
Template Conservation																																															.	.
Template Sequence		F	T	L	S	E	E	I	L	K	S	D	K	Q	L	S	V	D	A	Q	F	F	T	K	P	L	T	D	G	M	A	I	R	S	E	G	K	I	Y	F	V	D	K	Q	A	S	.	.	L	S	D	G	L	W	L	V	D	I	K	G	A	I	S	I	R
Template Known Secondary structure						T	T												G	G	G		S	S			T	T							T	T							T	T			.	.	S		S								T	T
Template Predicted Secondary structure																																															.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions