Job Description P77626 Confidence 84.90% Date Thu Jan 5 12:31:16 GMT 2012 Rank 313 Aligned Residues 72 % Identity 7% Template c1jumB_ PDB info PDB header:transcription Chain: B: PDB Molecule:hypothetical transcriptional regulator in qaca PDBTitle: crystal structure of the multidrug binding transcriptional2 repressor qacr bound to the natural drug berberine Resolution 2.98 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.			.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		E	N	L	A	R	F	L	S	T	T	L	K	Q	L	R	Q	Q	.	.	R	G	W	S	L	S	R	L	A	E	A	T	G	V	S	K	A	M	L	G	Q	I	E	R	N	E	S	S	P	T	V	A	T	L	W	K	I	A	T	G	L	N	V	P	F	S	T	F	I	S	P	P	Q	S	A
Query Conservation																			.	.
Alig confidence																			.	.
Template Conservation
Template Sequence		N	L	K	D	K	I	L	G	V	A	K	E	L	F	I	K	N	G	Y	N	A	T	T	T	G	E	I	V	K	L	S	E	S	S	K	G	N	L	Y	Y	H	F	K	T	K	E	N	L	F	L	E	I	L	N	I	E	E	S	K	W	Q	E	Q	W	K	K	E	Q	I	K	A	K	T	N
Template Known Secondary structure																		T		T	T	T	S									T	T										S		S																								T	T	S			S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions