Job Description P77626 Confidence 89.80% Date Thu Jan 5 12:31:16 GMT 2012 Rank 247 Aligned Residues 46 % Identity 28% Template c1hf0A_ PDB info PDB header:transcription factor Chain: A: PDB Molecule:octamer-binding transcription factor 1; PDBTitle: crystal structure of the dna-binding domain of oct-1 bound2 to dna as a dimer Resolution 2.7 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.							.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.
Query Sequence		M	E	N	L	A	R	F	L	S	T	T	L	K	Q	L	R	Q	Q	R	G	W	S	L	S	R	L	A	E	A	T	G	.	.	.	.	.	.	V	S	K	A	M	L	G	Q	I	E	R	N	E	S	S	P
Query Conservation																																	.	.	.	.	.	.
Alig confidence								.																									.	.	.	.	.	.
Template Conservation								.
Template Sequence		L	E	E	L	E	Q	.	F	A	K	T	F	K	Q	R	R	I	K	L	G	F	T	Q	G	D	V	G	L	A	M	G	K	L	Y	G	N	D	F	S	Q	T	T	I	S	R	F	E	A	L	N	L	S	F
Template Known Secondary structure								.												T	T														S	S													T	T		S
Template Predicted Secondary structure								.
Template SS confidence
		6	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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