|   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | |
. | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | |
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|
. | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
|
. | . | . | . | . | 70 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
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|  |  |  | . |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  | . | . | . |
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|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  | . | . |
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|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
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| . |
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| . |
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. |
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| . |
. |
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Query Sequence |   |
A | H | S | V | K | L | R | P | L | E | R | E | D | . |
L | R | Y | V | H | Q | L | D | N | N | A | S | V | M | R | Y | . |
. |
. |
W | F | E | E | P | Y | E | A | F | V | E | L | S | D | L | Y | D | K | H | I | H | D | Q | S | E | R | R | F | V | V | E | C | . |
. |
D | G | E | K | A | G | L | V | E | L | V | E | I |
Query Conservation |   |
  |   |   |
|   |
|
|   |   |   |   |   |
| . |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
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| . |
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| . | . | . |
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| . | . |
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Template Conservation |   |
|   |
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|   |
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|   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
Template Sequence |   |
G | R | Y | V | R | L | E | P | L | N | A | Q | K | H | G | D | E | L | F | A | A | S | S | V | E | D | A | E | Q | R | F | T | W | L | F | E | T | P | P | A | T | R | A | E | F | E | P | W | L | D | K | A | S | K | S | D | D | P | L | F | F | A | V | I | D | K | A | S | G | K | V | A | G | R | Q | A | L | M | R | I |
Template Known Secondary structure |   |
| S | S |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  | T | T | S | T | T |  |  |  |  | T | T | T | S | S | S |
|
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | S |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
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|  |  |  |
|  |  |  |  |  |  |  |  |
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|  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . |
  |
  |   |
78 | . | 80 | . | . | . | . | . | . | . | |
. | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
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|  |  |  |  |  | . |  |  |  |
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|  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
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|  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
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|  |  |  |
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|  |  |
Query SS confidence |   |
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| . |
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Query Sequence |   |
N | H | V | H | R | R | A | E | F | Q | . |
I | I | I | S | P | E | Y | Q | G | K | G | L | A | T | R | A | A | K | L | A | M | D | Y | G | F | T | V | L | N | L | Y | K | L | Y | L | I | V | D | K | E | N | E | K | A | I | H | I | Y | R | K | L | G | F | S | V | E | G | E | L | M | H | E | F | F | I | N | G | Q | Y |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
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| . |
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Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|   |   |   |
|
|   |   |   |
|
|   |   |
|
|   |   |
|
|
|   |
|
|   |
|   |
|   |   |   |
|   |
|
|   |   |
|   |
|
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|
|
|   |   |
|
|   |
|
|   |   |   |   |   |   |
|   |   |
Template Sequence |   |
D | P | A | N | G | V | I | E | I | G | S | I | Y | W | G | P | L | I | S | R | R | P | A | A | T | E | A | Q | F | L | F | M | Q | Y | V | F | D | V | L | G | Y | R | R | Y | E | W | E | C | H | N | E | N | G | P | S | R | R | A | A | E | R | F | G | F | R | F | E | G | I | F | R | Q | H | M | V | V | K | G | R | N |
Template Known Secondary structure |   |
 | T | T | T | T |  |  |  |  |  |  |  |  |  |
| T | T | T | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
| S |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
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|
|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |
|
|  |  |
Template SS confidence |   |
|
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  |   |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . |
  |
  |   |
157 | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
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|
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|
Query Sequence |   |
R | N | A | I | R | M | C | I | F | Q | H | Q | Y | L | A | E | H | K | T | P | G | Q | T | L | L | K | P |
Query Conservation |   |
  |
|   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
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|
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|
|
|
|
|
|
| . |
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|
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|
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|
Template Conservation |   |
  |
|   |   |   |
|
|
|
|   |   |
|
|   |   |   | . |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
R | D | T | A | W | F | S | V | L | D | S | E | W | P | A | L | . |
K | Q | A | Y | Q | A | W | L | A | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | G | G | G |  |  |  |  | . |  |  |  |  |  |  |  |  | S | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
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|
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|
|
|
|
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|
|
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|
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|
  |   |
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | |
. | . | . | . | 200 | . | . | . | . | . |
  |