Job Description P0A951 Confidence 99.10% Date Thu Jan 5 11:09:23 GMT 2012 Rank 106 Aligned Residues 128 % Identity 16% Template c3fynA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:integron gene cassette protein hfx_cass3; PDBTitle: crystal structure from the mobile metagenome of cole2 harbour salt marsh: integron cassette protein hfx_cass3 Resolution 1.45 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	K	L	R	P	L	E	R	E	D	L	R	Y	V	H	Q	L	D	N	N	A	S	V	M	R	Y	W	F	E	E	P	Y	E	A	F	V	E	L	S	D	L	Y	D	K	H	I	H	D	Q	S	E	R	R	F	V	V	E	C	D	G	E	K	A	G	L	V	E	L	V	E	I	N	H	V	H	R	R	A	E
Query Conservation
Alig confidence																							.	.	.
Template Conservation																							.	.	.
Template Sequence		S	P	Q	V	R	T	A	H	I	G	D	V	P	V	L	V	R	L	X	S	E	.	.	.	F	Y	Q	E	A	G	F	A	L	P	H	D	A	A	I	R	A	F	K	A	L	L	G	K	P	D	L	G	R	I	W	L	I	A	E	G	T	E	S	V	G	Y	I	V	L	T	L	G	F	S	X	E	Y	G	G	L
Template Known Secondary structure		G	G	G						G	G	G											.	.	.					T	T																			G	G	G									T	T														T	T	T	T
Template Predicted Secondary structure																							.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.				.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		86	.	.	.					90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure						.	.	.	.
Query SS confidence						.	.	.	.
Query Sequence		F	Q	I	I	.	.	.	.	I	S	P	E	Y	Q	G	K	G	L	A	T	R	A	A	K	L	A	M	D	Y	G	F	T	V	L	N	L	Y	K	L	Y	L	I	V	D	K	E	N	E	K	A	I	H	I	Y	R	K	L	G	F	S	V	E	G	E
Query Conservation						.	.	.	.
Alig confidence						.	.	.	.																							.													.	.	.	.	.	.	.	.
Template Conservation																																.													.	.	.	.	.	.	.	.
Template Sequence		R	G	F	V	D	D	F	F	V	R	P	N	A	R	G	K	G	L	G	A	A	A	L	Q	T	V	K	Q	G	C	.	C	D	L	G	V	R	A	L	L	V	E	T	.	.	.	.	.	.	.	.	G	V	Y	S	R	A	G	F	E	E	S	G	R
Template Known Secondary structure												G	G	G	T	T	S	S														.			T	T									.	.	.	.	.	.	.	.						T	T
Template Predicted Secondary structure																																.													.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120									.	.	.	.	.	.	.	.	.	130	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions