|   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | E | E | Q | E | L | L | L | A | S | I | R | E | L | I | T | T | N | F | P | E | E | Y | F | R | T | C | D | Q | N | G | T | Y | P | R | E | F | M | R | A | L | A | D | N | G | I | S | M | L | G | V | P | E | E | F | G | G | I | P | A | D | Y | V | T | Q | M | L | A | L | M | E | V | S | K | C | G | A | P | A | F |
Query Conservation |   |
|   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |
|
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   | . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
S | P | E | N | T | R | R | R | R | E | I | E | N | L | I | L | N | D | . |
. |
. |
P | D | F | Q | H | E | D | Y | N | F | L | T | R | S | Q | R | Y | E | V | A | V | K | K | S | A | T | M | V | K | K | M | R | E | Y | G | I | S | D | . |
. |
. |
. |
. |
P | E | E | I | M | W | F | K | N | S | V | H | R | G | H | P |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| . | . | . | G | G | G |
|
| S |
| G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
26 | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | |
|
|
. | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
  |
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | |
. | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | |
|
. | . | . | . | . | . | . | 150 | |
|
|
|
|
. | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  | . | . |  |
|
|  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
Query Sequence |   |
L | I | T | N | G | Q | C | I | H | S | M | . |
R | R | F | G | S | A | E | Q | L | R | K | T | A | E | S | T | L | E | T | G | D | P | A | Y | A | L | A | L | T | E | P | G | A | G | S | D | N | N | S | A | T | T | T | Y | T | R | . |
. |
K | N | G | K | V | Y | I | N | . |
. |
. |
. |
. |
G | Q | K | T | F | I | T |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |
|
|
|   |   |   |   |   |   |   |
|   |   | . | . |   |   |   |
|   |   |
|   | . | . | . | . | . |
|   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|
|
|   |
|   |
|
|   |
|   |   |
|   |   |   |   |   |   |
|   |
|
|
|   |
|
|
|
|   |   |   |
|   |
|
|
|   |   |   |   |
|
|
|   |   |
|
|
|
|   |
|   |   |
|   |
|   |
|
|
|
Template Sequence |   |
E | P | L | D | L | H | L | G | M | F | L | P | T | L | L | Q | A | T | A | E | Q | Q | E | R | F | F | M | P | A | W | N | L | E | I | T | G | T | Y | A | Q | T | E | M | G | H | G | T | H | L | R | G | L | E | T | T | A | T | Y | D | P | K | T | Q | E | F | I | L | N | S | P | T | V | T | S | I | K | W | W | P | G |
Template Known Secondary structure |   |
| T | T |  |  |  |  |  | T |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
|  |  |  |  |
|
| B | T | T | B | S | S |
| G | G | G |
|
|
|  |  |  |  |  | T | T | T | T |  |  |  |  |  |
|
| S | S | T | T | S |  |  |
|
| T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . |
  |
  |   |
158 | |
. | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | 190 | . | . | . | . | . | . | . | |
. | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . |
Predicted Secondary structure |   |
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |
|
| . |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|  |  |  |  |
|
|
|
Query SS confidence |   |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | . |
A | K | E | Y | P | Y | M | L | V | L | A | R | D | P | Q | P | K | D | P | K | K | A | F | T | L | W | W | V | D | . |
. |
. |
. |
. |
. |
. |
S | S | K | P | G | I | K | I | N | P | . |
L | H | K | I | G | W | H | M | L | S | T | C | E | V | Y | L | D | N | V | E | V | E | E | S | D | M | V | G | E |
Query Conservation |   |
  | . |   |   |   |
|
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   | . | . | . | . | . | . | . |   |   |   |   |
|
|   |
|   |   | . |   |   |   |
|
|   |
|   |   |   |
|   |   |
|   |
|   |   |
|   |
|
|   |   |   |
|
|
|   |
Alig confidence |   |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |   |
|
|   |
|
|
|   |   |   | . |   |   |   |   |
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |
|   |   |
|
|
|
|   |   |
|
|
|   |   |
Template Sequence |   |
G | L | G | K | T | S | N | H | A | I | V | L | A | Q | L | I | T | Q | . |
G | E | C | Y | G | L | H | A | F | V | V | P | I | R | E | I | G | T | H | K | P | L | P | G | I | T | V | G | D | I | G | P | K | F | G | Y | E | E | M | D | N | G | Y | L | K | M | D | N | Y | R | I | P | R | E | N | M | L | M | K |
Template Known Secondary structure |   |
T | T | T | T | T |
| S |  |  |  |  |  |  |  |  |  |  | T | . | T |  |  |  |  |  |  |  |  |  |  |  |
| B |
| T | T | T |
|
| B |
| T | T |  |  |  |  |  |
|
|
|
| S | S |
| T | T |
|
|
|  |  |  |  |  | S | S |  |  |  |  | G | G | G | B |
|
| S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
| . |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |
|
|  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
179 | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | |
. | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . |
  |