Job Description P0A9U8 Confidence 100.00% Date Thu Jan 5 11:11:26 GMT 2012 Rank 40 Aligned Residues 225 % Identity 24% Template d2d29a2 SCOP info Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase NM domain-like Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains Resolution 1.65

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	F	S	L	T	E	E	Q	E	L	L	L	A	S	I	R	E	L	I	T	T	N	F	P	E	E	Y	F	R	T	C	D	Q	N	G	T	Y	P	R	E	F	M	R	A	L	A	D	N	G	I	S	M	L	G	V	P	E	E	F	G	G	I	P	A	D	Y	V	T	Q	M	L	A	L	M	E	V	S	K	C
Query Conservation
Alig confidence																												.
Template Conservation																												.
Template Sequence		L	W	F	E	E	G	A	E	E	R	Q	V	L	G	P	F	R	E	F	L	K	A	E	V	A	P	.	G	A	A	E	R	D	R	T	G	A	F	P	W	D	L	V	R	K	L	A	E	F	G	V	F	G	A	L	V	P	E	A	Y	G	G	A	G	L	S	T	R	L	F	A	R	M	V	E	A	I	A	Y	Y
Template Known Secondary structure			T	T	S																				T	G	G	.	G																				T	T	T	G	G	G	S	S	S		G	G	G	T
Template Predicted Secondary structure																												.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		G	A	P	A	F	L	I	T	N	G	Q	C	I	H	S	M	.	.	R	R	F	G	S	A	E	Q	L	R	K	T	A	E	S	T	L	E	T	G	D	P	A	Y	A	L	A	L	T	E	P	G	A	G	S	D	N	N	S	A	T	T	T	Y	T	R	K	N	G	K	V	Y	I	N	G	Q	K	T	F	I	T	G
Query Conservation																		.	.
Alig confidence																		.	.
Template Conservation
Template Sequence		D	G	A	L	A	L	T	V	A	S	H	N	S	L	A	T	G	H	I	L	L	A	G	S	E	A	Q	K	E	A	F	L	P	K	L	A	S	G	E	A	L	G	A	W	G	L	T	E	P	G	S	G	S	D	A	A	A	L	K	T	K	A	E	K	V	E	G	G	W	R	L	N	G	T	K	Q	F	I	T	Q
Template Known Secondary structure															T																							T	S	S	S								B	T	T	B	S	S	S	G	G	G									T	T													T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.				180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.																		.
Query SS confidence																							.	.	.																		.
Query Sequence		A	K	E	Y	P	Y	M	L	V	L	A	R	D	P	Q	P	K	D	P	K	K	.	.	.	A	F	T	L	W	W	V	D	S	S	K	P	G	I	K	I	N	.	P	L	H	K	I	G	W	H	M	L	S	T	C	E	V	Y	L	D	N	V	E	V	E	E	S	D	M	V	G	E
Query Conservation																							.	.	.																		.
Alig confidence																							.	.	.																		.
Template Conservation
Template Sequence		G	S	V	A	G	V	Y	V	V	M	A	R	T	D	P	P	P	S	P	E	R	K	H	Q	G	I	S	A	F	A	F	F	R	P	E	R	G	L	K	V	G	R	K	E	E	K	L	G	L	T	A	S	D	T	A	Q	L	I	L	E	D	L	F	V	P	E	E	A	L	L	G	E
Template Known Secondary structure		T	T	T		S									S			S		G	G	G	T	T	T	T										S	S	S										S	S		T	T	S														G	G	G			S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions