Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9U8
Confidence100.00%DateThu Jan 5 11:11:26 GMT 2012
Rank40Aligned Residues225
% Identity24%Templated2d29a2
SCOP infoAcyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase NM domain-like Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains
Resolution1.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MDFSLTEEQELLLASIRELITTNFPEEYFRTCDQNGTYPREFMRALADNGISMLGVPEEFGGIPADYVTQMLALMEVSKC
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Template Sequence  LWFEEGAEERQVLGPFREFLKAEVAP. GAAERDRTGAFPWDLVRKLAEFGVFGALVPEAYGGAGLSTRLFARMVEAIAYY
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TGG.G



TTTGGGSSS
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   3......10.........20........ .30.........40.........50.........60.........70.........80.
 
   81........90...... ...100.........110.........120.........130.........140.........150........
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Query Sequence  GAPAFLITNGQCIHSM. . RRFGSAEQLRKTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVYINGQKTFITG
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Template Sequence  DGALALTVASHNSLATGHILLAGSEAQKEAFLPKLASGEALGAWGLTEPGSGSDAAALKTKAEKVEGGWRLNGTKQFITQ
Template Known Secondary structure 
T

TSSS


BTTBSSSGGG


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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   159160.........170......... 180.........190...... ...200.........210.........220......
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Query Sequence  AKEYPYMLVLARDPQPKDPKK. . . AFTLWWVDSSKPGIKIN. PLHKIGWHMLSTCEVYLDNVEVEESDMVGE
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Template Sequence  GSVAGVYVVMARTDPPPSPERKHQGISAFAFFRPERGLKVGRKEEKLGLTASDTAQLILEDLFVPEEALLGE
Template Known Secondary structure  TTT
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S
GGGTTTT

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   162.......170.........180.........190.........200.........210.........220.........230...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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