Job Description P0A9U8 Confidence 100.00% Date Thu Jan 5 11:11:26 GMT 2012 Rank 45 Aligned Residues 225 % Identity 16% Template d2c12a2 SCOP info Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase NM domain-like Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains Resolution 2.07

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.							.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.
Query Sequence		M	D	F	S	L	T	E	E	Q	E	L	L	L	A	S	I	R	E	L	I	T	T	N	F	P	E	E	Y	F	R	T	C	D	Q	N	G	T	.	.	.	.	.	.	Y	P	R	E	F	M	R	A	L	A	D	N	G	I	S	M	L	G	V	P	E	E	F	G	G	I	P	A	D	Y	V	T	Q	M	L	A	L
Query Conservation																																							.	.	.	.	.	.
Alig confidence																												.											.	.	.	.	.	.
Template Conservation																												.
Template Sequence		V	D	F	K	L	S	P	S	Q	L	E	A	R	R	H	A	Q	A	F	A	N	T	V	L	T	K	.	A	S	A	E	Y	S	T	Q	K	D	Q	L	S	R	F	Q	A	T	R	P	F	Y	R	E	A	V	R	H	G	L	I	K	A	Q	V	P	I	P	L	G	G	T	M	E	S	L	V	H	E	S	I	I	L
Template Known Secondary structure																								T	G	G	G	.						T	T		S	S							T	T										T	T	T	T	G	G	G	S	B	G	G	G	T			B
Template Predicted Secondary structure																												.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.						.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																							.																					.	.																						.	.	.	.	.
Query SS confidence																							.																					.	.																						.	.	.	.	.
Query Sequence		M	E	V	S	K	C	G	A	P	A	F	L	I	T	N	G	Q	C	I	H	S	.	M	R	R	F	G	S	A	E	Q	L	R	K	T	A	E	S	T	L	E	T	.	.	G	D	P	A	Y	A	L	A	L	T	E	P	G	A	G	S	D	N	N	S	A	.	.	.	.	.	T	T	T	Y	T	R	K	N	G	K
Query Conservation																							.																					.	.																						.	.	.	.	.
Alig confidence																							.																					.	.																						.	.	.	.	.
Template Conservation
Template Sequence		E	E	L	F	A	V	E	P	A	T	S	I	T	I	V	A	T	A	L	G	L	M	P	V	I	L	C	D	S	P	S	L	Q	E	K	F	L	K	P	F	I	S	G	E	G	E	P	L	A	S	L	M	H	S	E	P	N	G	T	A	N	W	L	Q	K	G	G	P	G	L	Q	T	T	A	R	K	V	G	N	E
Template Known Secondary structure						T	T			T	T																	S	S									T	G	G	G	G	S	S		S											T	T		S	T	T	T	T		T	T	S				S							T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.						.	.	.	.	.	170	.	.	.									.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.								.	.	200	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.										.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.										.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.
Query Sequence		V	Y	I	N	G	Q	K	T	F	I	T	G	A	K	E	Y	P	Y	.	.	.	.	.	M	L	V	L	A	R	D	P	Q	.	.	.	.	.	.	.	.	P	K	D	P	K	K	A	F	T	L	W	W	V	D	S	S	K	P	G	I	K	I	N	P	.	.	.	.	.	.	.	L	H	K	I	G	W	H	M	L
Query Conservation																				.	.	.	.	.										.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.										.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	V	I	S	G	E	K	L	W	P	S	N	S	G	G	W	D	Y	K	G	A	D	L	A	C	V	V	C	R	V	S	D	D	P	S	K	P	Q	D	P	N	V	D	P	A	T	Q	I	A	V	L	L	V	T	R	E	T	I	A	N	N	K	K	D	A	Y	Q	I	L	G	E	P	E	L	A	G	H	I	T	T
Template Known Secondary structure												T	T	T	T	T	T	T	S	S			S										S		T	T	S				T	T	S		G	G	G	G													T	S		G	G	G										S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	C	E	V	Y	L	D	N	V	E	V	E	E	S	D	M	V	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	P	H	T	R	F	T	E	F	H	V	P	H	E	N	L	L	C	T
Template Known Secondary structure															G	G	G	B
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions