Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9U8
Confidence100.00%DateThu Jan 5 11:11:26 GMT 2012
Rank45Aligned Residues225
% Identity16%Templated2c12a2
SCOP infoAcyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase NM domain-like Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains
Resolution2.07

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30....... ..40.........50.........60.........70....
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Query Sequence  MDFSLTEEQELLLASIRELITTNFPEEYFRTCDQNGT. . . . . . YPREFMRALADNGISMLGVPEEFGGIPADYVTQMLAL
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Template Sequence  VDFKLSPSQLEARRHAQAFANTVLTK. ASAEYSTQKDQLSRFQATRPFYREAVRHGLIKAQVPIPLGGTMESLVHESIIL
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TGGG.TT
SSTTTTTTGGGSBGGGT

B

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   2.......10.........20....... ..30.........40.........50.........60.........70.........80
 
   75....80.........90..... ....100.........110..... ....120.........130...... ...140......
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Query Sequence  MEVSKCGAPAFLITNGQCIHS. MRRFGSAEQLRKTAESTLET. . GDPAYALALTEPGAGSDNNSA. . . . . TTTYTRKNGK
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Template Sequence  EELFAVEPATSITIVATALGLMPVILCDSPSLQEKFLKPFISGEGEPLASLMHSEPNGTANWLQKGGPGLQTTARKVGNE
Template Known Secondary structure  TT

TTSS
TGGGGSS
S





TT
STTTT
TTS


S
TT
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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   147..150.........160.... .....170... ......180.........190....... ..200......
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Query Sequence  VYINGQKTFITGAKEYPY. . . . . MLVLARDPQ. . . . . . . . PKDPKKAFTLWWVDSSKPGIKINP. . . . . . . LHKIGWHML
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Template Sequence  WVISGEKLWPSNSGGWDYKGADLACVVCRVSDDPSKPQDPNVDPATQIAVLLVTRETIANNKKDAYQILGEPELAGHITT
Template Known Secondary structure 

TTTTTTTSS

S
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TTS


TTS
GGGG
TS
GGG



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TT
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   161........170.........180.........190.........200.........210.........220.........230.........240
 
   207..210.........220......
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Query Sequence  STCEVYLDNVEVEESDMVGE
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Template Sequence  SGPHTRFTEFHVPHENLLCT
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GGGB


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   241........250.........260
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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