Job Description P0A9U8 Confidence 99.83% Date Thu Jan 5 11:11:26 GMT 2012 Rank 68 Aligned Residues 168 % Identity 12% Template d1u8va2 SCOP info Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase NM domain-like Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains Resolution 1.60

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																																																																	.	.
Query SS confidence																																																																	.	.
Query Sequence		R	A	L	A	D	N	G	I	S	M	L	G	V	P	E	E	F	G	G	I	P	A	D	Y	V	T	Q	M	L	A	L	M	E	V	S	K	C	G	A	P	A	F	L	I	T	N	G	Q	C	I	H	S	M	R	R	F	G	S	A	E	Q	L	R	.	.	K	T	A	E	S	T	L	E	T	G	D	P	A	Y	A
Query Conservation																																																																	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	D	L	R	K	K	V	K	M	Q	R	L	L	G	Q	K	T	A	S	C	.	.	.	.	.	.	.	.	.	.	.	.	.	F	Q	R	C	V	G	M	D	A	F	N	A	V	F	S	T	T	Y	E	I	D	Q	K	Y	G	T	N	Y	H	K	N	F	T	E	Y	L	K	Y	I	Q	E	N	D	L	I	V	D
Template Known Secondary structure																			S	S		.	.	.	.	.	.	.	.	.	.	.	.	.			T																																								T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.														100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		122	.	.	.	.	.	.	.	130									.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.
Query Sequence		L	A	L	T	E	P	G	A	G	.	.	.	.	.	.	.	.	S	D	N	N	S	A	T	T	T	Y	T	R	K	N	G	K	V	Y	I	N	G	Q	K	T	F	I	T	G	A	K	E	Y	P	Y	M	L	V	L	A	R	D	P	Q	P	K	D	P	K	K	A	F	T	L	W	W	V	D	S	S	K	P	G	I
Query Conservation											.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	A	M	T	D	P	K	G	D	R	G	L	A	P	S	A	Q	K	D	P	D	L	F	L	R	I	V	E	K	R	E	D	G	I	V	V	R	G	A	K	A	H	Q	T	G	S	I	N	S	H	E	H	I	I	M	P	T	I	A	M	T	E	A	D	K	D	Y	A	V	S	F	A	C	P	S	D	A	D	G	L
Template Known Secondary structure									S		T	T	S		G	G	G		S	S	T	T	S	S								S	S										S		T	T		T	T		S							S	S				G	G	G	G	G	G								T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		194	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210																.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure					.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	N	.	P	L	H	K	I	G	W	H	M	L	S	T	C	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Y	L	D	N	V	E	V	E	E	S	D	M	V
Query Conservation					.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	M	I	Y	G	R	Q	S	C	D	T	R	K	M	E	E	G	A	D	I	D	L	G	N	K	Q	F	G	G	Q	E	A	L	V	V	F	D	N	V	F	I	P	N	D	R	I	F
Template Known Secondary structure									T	T	G	G	G	G	G	S	T	T			G	G	G	S	S	S	S																	G	G	G
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions