Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9U8
Confidence100.00%DateThu Jan 5 11:11:26 GMT 2012
Rank41Aligned Residues224
% Identity23%Templated1rx0a2
SCOP infoAcyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase NM domain-like Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains
Resolution1.77

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MDFSLTEEQELLLASIRELITTNFPEEYFRTCDQNGTYPREFMRALADNGISMLGVPEEFGGIPADYVTQMLALMEVSKC
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Template Sequence  PSMGLNEEQKEFQKVAFDFAAREM. APNMAEWDQKELFPVDVMRKAAQLGFGGVYIQTDVGGSGLSRLDTSVIFEALATG
Template Known Secondary structure  TTTT

T.T


TT
SSTTS
GGGT




TT
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   15....20.........30........ .40.........50.........60.........70.........80.........90...
 
   81........90...... ...100.........110.........120.........130.........140.........150.........
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Query Sequence  GAPAFLITNGQCIHSM. RRFGSAEQLRKTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVYINGQKTFITGA
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Template Sequence  CTSTTAYISIHNMCAWMIDSFGNEEQRHKFCPPLCTMEKFASYCLTEPGSGSDAASLLTSAKKQGDHYILNGSKAFISGA
Template Known Secondary structure 
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TTSS


BTTBSSSGGG


TTTT
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   94.....100.........110.........120.........130.........140.........150.........160.........170...
 
   160.........170.........180.........190....... ..200.........210.........220.......
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Query Sequence  KEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINP. LHKIGWHMLSTCEVYLDNVEVEESDMVGEE
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Template Sequence  GESDIYVVMCRTGGPGP. . KGISCIVVEKGTPGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGSE
Template Known Secondary structure  TT
SSSSSSG..GGTT
TT





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   174.....180.........190 .........200.........210.........220.........230.........240
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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