Job Description P0A9U8 Confidence 100.00% Date Thu Jan 5 11:11:26 GMT 2012 Rank 49 Aligned Residues 204 % Identity 19% Template d1r2ja2 SCOP info Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase NM domain-like Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains Resolution 2.10

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		R	E	L	I	T	T	N	F	P	E	E	Y	F	R	T	C	D	Q	N	G	T	Y	P	R	E	F	M	R	A	L	A	D	N	G	I	S	M	L	G	V	P	E	E	F	G	G	I	P	A	D	Y	V	T	Q	M	L	A	L	M	E	V	S	K	C	G	A	P	A	F	L	I	T	N	G	Q	C	I	H	S	.
Query Conservation																																																																																	.
Alig confidence												.																																																																					.
Template Conservation												.
Template Sequence		D	A	L	L	T	D	L	V	G	D	.	R	A	A	E	W	D	T	S	G	E	L	P	R	D	L	L	V	R	L	G	A	D	G	L	L	C	A	E	V	A	A	E	H	G	G	L	G	L	G	S	R	E	N	G	E	F	T	A	H	V	G	S	L	C	S	S	L	R	S	V	M	T	S	Q	G	M	A	A	W
Template Known Secondary structure										S	S	.									T													T	T	T	T	S	T	T	S		G	G	G	T
Template Predicted Secondary structure												.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	R	F	G	S	A	E	Q	L	R	K	T	A	E	S	T	L	E	T	G	D	P	A	Y	A	L	A	L	T	E	P	G	A	G	S	D	N	N	S	A	T	T	T	Y	T	R	K	N	G	K	V	Y	I	N	G	Q	K	T	F	I	T	G	A	K	E	Y	P	Y	M	L	V	L	A	R	D	P	Q	P	K
Query Conservation
Alig confidence																							.	.
Template Conservation																							.	.
Template Sequence		T	V	Q	R	L	G	D	A	G	Q	R	A	T	F	L	K	E	L	T	S	G	.	.	L	A	A	V	G	F	S	E	R	Q	A	G	S	D	L	S	A	M	R	T	R	V	R	L	D	G	D	T	A	V	V	D	G	H	K	V	W	T	T	A	A	A	Y	A	D	H	L	V	V	F	G	L	Q	E	D	G	S
Template Known Secondary structure							S												T	T			.	.								B	T	T	B	S	S		G	G	G									T	T												T	T	T	T	T		S							B		S	S	S
Template Predicted Secondary structure																							.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		D	P	K	K	A	F	T	L	W	W	V	D	S	S	K	P	G	I	K	I	N	P	.	L	H	K	I	G	W	H	M	L	S	T	C	E	V	Y	L	D	N	V	E	V	E	E	S	D	M	V	G	E	E	G
Query Conservation																								.
Alig confidence			.	.	.	.	.																	.
Template Conservation			.	.	.	.	.
Template Sequence		G	.	.	.	.	.	A	V	V	V	V	P	A	D	T	P	G	V	R	V	E	R	V	P	K	P	S	G	C	R	A	A	G	H	A	D	L	H	L	D	Q	V	R	V	P	A	G	A	V	L	A	G	S	G
Template Known Secondary structure			.	.	.	.	.							T	T	S	T	T							S	S		S	S	S	T	T	S														G	G	G	B		T	T	T	T
Template Predicted Secondary structure			.	.	.	.	.
Template SS confidence
		163						.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions