Job Description P0A9U8 Confidence 100.00% Date Thu Jan 5 11:11:26 GMT 2012 Rank 44 Aligned Residues 225 % Identity 24% Template d1jqia2 SCOP info Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase NM domain-like Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains Resolution 2.25

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	S	L	T	E	E	Q	E	L	L	L	A	S	I	R	E	L	I	T	T	N	F	P	E	E	Y	F	R	T	C	D	Q	N	G	T	Y	P	R	E	F	M	R	A	L	A	D	N	G	I	S	M	L	G	V	P	E	E	F	G	G	I	P	A	D	Y	V	T	Q	M	L	A	L	M	E	V	S	K	C	G
Query Conservation
Alig confidence																											.
Template Conservation																											.
Template Sequence		S	V	E	L	P	E	T	H	Q	M	L	R	Q	T	C	R	D	F	A	E	K	E	L	V	P	.	I	A	A	Q	L	D	K	E	H	L	F	P	T	S	Q	V	K	K	M	G	E	L	G	L	L	A	M	D	V	P	E	E	L	S	G	A	G	L	D	Y	L	A	Y	S	I	A	L	E	E	I	S	R	G	C
Template Known Secondary structure			S																					T	T	T	.	T								T														T	T	T	S	S	S	S		G	G	G	T
Template Predicted Secondary structure																											.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		A	P	A	F	L	I	T	N	G	Q	C	I	H	S	.	.	M	R	R	F	G	S	A	E	Q	L	R	K	T	A	E	S	T	L	E	T	G	D	P	A	Y	A	L	A	L	T	E	P	G	A	G	S	D	N	N	S	A	T	T	T	Y	T	R	K	N	G	K	V	Y	I	N	G	Q	K	T	F	I	T	G	A
Query Conservation																.	.
Alig confidence																.	.
Template Conservation
Template Sequence		A	S	T	G	V	I	M	S	V	N	N	S	L	Y	L	G	P	I	L	K	F	G	S	S	Q	Q	K	Q	Q	W	I	T	P	F	T	N	G	D	K	I	G	C	F	A	L	S	E	P	G	N	G	S	D	A	G	A	A	S	T	T	A	R	E	E	G	D	S	W	V	L	N	G	T	K	A	W	I	T	N	S
Template Known Secondary structure														T	T																	T	G	G	G	S	S	S	S									B	T	T	B	S	S	S	T	T										S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		K	E	Y	P	Y	M	L	V	L	A	R	D	P	Q	P	K	D	P	K	K	A	F	T	L	W	W	V	D	S	S	K	P	G	I	K	I	N	P	.	L	H	K	I	G	W	H	M	L	S	T	C	E	V	Y	L	D	N	V	E	V	E	E	S	D	M	V	G	E	E	G
Query Conservation																																								.
Alig confidence																	.																							.
Template Conservation																	.
Template Sequence		W	E	A	S	A	T	V	V	F	A	S	T	D	R	S	.	R	Q	N	K	G	I	S	A	F	L	V	P	M	P	T	P	G	L	T	L	G	K	K	E	D	K	L	G	I	R	A	S	S	T	A	N	L	I	F	E	D	C	R	I	P	K	E	N	L	L	G	E	P	G
Template Known Secondary structure		T	T		S								S		G	G	.	G	G	G	G	S								S	S		T	T										S	S		T	T	S														G	G	G			S	S
Template Predicted Secondary structure																	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions