Job Description P0A9U8 Confidence 100.00% Date Thu Jan 5 11:11:26 GMT 2012 Rank 12 Aligned Residues 371 % Identity 21% Template c3swoA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glutaryl-coa dehydrogenase; PDBTitle: crystal structure of a glutaryl-coa dehydrogenase from mycobacterium2 smegmatis in complex with fadh2 Resolution 1.45 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	F	S	L	T	E	E	Q	E	L	L	L	A	S	I	R	E	L	I	T	T	N	F	P	E	E	Y	F	R	T	C	D	Q	N	G	T	Y	P	R	E	F	M	R	A	L	A	D	N	G	I	S	M	L	G	V	P	E	E	F	G	G	I	P	A	D	Y	V	T	Q	M	L	A	L	M	E	V	S	K	C
Query Conservation
Alig confidence																										.																																	.
Template Conservation																										.																																	.
Template Sequence		T	D	R	L	L	D	Q	D	E	R	D	I	A	A	T	V	R	Q	F	V	D	T	R	L	.	K	P	N	V	E	G	W	F	E	S	A	T	L	P	S	E	L	A	K	E	F	G	N	L	G	V	L	G	M	H	L	Q	.	G	Y	G	C	A	G	T	N	A	V	S	Y	G	L	A	C	M	E	L	E	A	G
Template Known Secondary structure		G	G	G	G	S																			T	.											T				T	T									T		T	T	T	T	S		.	S	T	T
Template Predicted Secondary structure																										.																																	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		G	A	P	A	F	L	I	T	N	G	Q	C	.	.	I	H	S	M	R	R	F	G	S	A	E	Q	L	R	K	T	A	E	S	T	L	E	T	G	D	P	A	Y	A	L	A	L	T	E	P	G	A	G	S	D	N	N	S	A	T	T	T	Y	T	R	K	N	G	K	V	Y	I	N	G	Q	K	T	F	I	T	G
Query Conservation														.	.
Alig confidence														.	.
Template Conservation
Template Sequence		D	S	G	F	R	S	F	V	S	V	Q	G	S	L	S	M	F	S	I	Y	R	Y	G	S	E	E	Q	K	N	E	W	L	P	R	L	A	A	G	D	A	I	G	C	F	G	L	T	E	P	D	F	G	S	N	P	A	G	M	R	T	R	A	R	R	D	G	S	D	W	I	L	N	G	T	K	M	W	I	T	N
Template Known Secondary structure													T	T	T																								T	S	S								B	T	T	B	S	S		G	G	G									T	T													T
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		A	K	E	Y	P	Y	M	L	V	L	A	R	D	P	Q	P	K	D	P	K	K	A	F	T	L	W	W	V	D	S	S	K	P	G	I	K	I	N	P	.	L	H	K	I	G	W	H	M	L	S	T	C	E	V	Y	L	D	N	V	E	V	E	E	S	D	M	V	G	E	E	G	M	G	F	L	N	V	M	Y	N
Query Conservation																																									.
Alig confidence																			.	.	.	.	.	.																	.																																		.
Template Conservation																			.	.	.	.	.	.																																																			.
Template Sequence		G	N	L	A	D	V	A	T	V	W	A	Q	T	D	D	G	I	.	.	.	.	.	.	R	G	F	L	V	P	T	D	T	P	G	F	T	A	N	E	I	H	R	K	L	S	L	R	A	S	V	T	S	E	L	V	L	D	N	V	R	L	P	A	S	A	Q	L	P	L	A	E	G	L	.	S	A	P	L	S	C
Template Known Secondary structure		T	T	T		S							B		T	T	S		.	.	.	.	.	.							T	T	S	T	T										S	S			S	S														G	G	G	B		T	T			S	T	.
Template Predicted Secondary structure																			.	.	.	.	.	.																																																			.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.							.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	M	E	R	L	I	N	A	A	R	S	T	G	F	A	E	C	A	F	E	D	A	A	R	Y	A	N	Q	R	I	A	F	G	K	P	I	G	H	N	Q	M	I	Q	E	K	L	A	L	M	A	I	K	I	D	N	M	R	N	M	V	L	K	V	A	W	Q	A	D	Q	H	Q	S	L	R	T	S	A	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	E	A	R	F	G	I	V	F	G	A	L	G	A	A	R	D	S	L	E	T	T	I	A	Y	T	Q	S	R	E	V	F	D	K	P	L	S	N	Y	Q	L	T	Q	E	K	L	A	N	M	T	V	E	L	G	K	G	M	L	L	A	I	H	L	G	R	I	K	D	A	E	G	V	R	P	E	Q	I	S	L
Template Known Secondary structure																																		T	T			G	G	G	S																														T	T
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	L	Y	C	A	R	T	A	M	E	V	I	D	D	A	I	Q	I	M	G	G	L	G	Y	T	D	E	A	R	V	S	R	F	W	R	D	V	R	C	E	R	I	G	G	G	T	D	E	I	M	I	Y	V	A	G	R	Q	I	L	K	D	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	K	L	N	N	V	R	E	A	I	A	I	A	R	E	C	R	T	L	L	G	G	S	G	I	T	L	E	Y	S	P	L	R	H	A	N	N	L	E	S	V	L	T	Y	E	G	T	S	E	M	H	L	L	S	I	G	K	A	L	T	G	K	A
Template Known Secondary structure																						G	G	G	G	G	S	S	S	S	T														S	S	S															S
Template Predicted Secondary structure
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions