Job Description P0A9U8 Confidence 100.00% Date Thu Jan 5 11:11:26 GMT 2012 Rank 26 Aligned Residues 366 % Identity 31% Template c3pfdB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of an acyl-coa dehydrogenase from mycobacterium2 thermoresistibile bound to reduced flavin adenine dinucleotide solved3 by combined iodide ion sad mr Resolution 2.10 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	E	L	L	L	A	S	I	R	E	L	I	T	T	N	F	P	E	E	Y	F	R	T	C	D	Q	N	G	T	Y	P	R	E	F	M	R	A	L	A	D	N	G	I	S	M	L	G	V	P	E	E	F	G	G	I	P	A	D	Y	V	T	Q	M	L	A	L	M	E	V	S	K	C	G	A	P	A	F	L	I
Query Conservation
Alig confidence																					.
Template Conservation																					.
Template Sequence		E	H	I	A	L	R	E	A	I	R	A	L	A	E	K	E	I	A	P	.	Y	A	A	E	V	D	E	K	A	R	F	P	E	E	A	L	A	A	L	N	S	S	G	F	S	A	I	H	V	P	E	E	Y	G	G	Q	G	A	D	S	V	A	T	C	I	V	I	E	E	V	A	R	V	D	C	S	A	S	L	I
Template Known Secondary structure																		T	G	G	.	G							T	T														T		S		T	T	S		G	G	G	T																		T	T
Template Predicted Secondary structure																					.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		T	N	G	Q	C	I	H	S	M	.	R	R	F	G	S	A	E	Q	L	R	K	T	A	E	S	T	L	E	T	G	D	P	A	Y	A	L	A	L	T	E	P	G	A	G	S	D	N	N	S	A	T	T	T	Y	T	R	K	N	G	K	V	Y	I	N	G	Q	K	T	F	I	T	G	A	K	E	Y	P	Y	M	L
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		P	A	V	N	K	L	G	T	M	G	L	I	L	R	G	S	E	E	L	K	K	Q	V	L	P	A	V	A	S	G	E	A	M	A	S	Y	A	L	S	E	R	E	A	G	S	D	A	A	S	M	R	T	R	A	V	A	D	G	D	D	W	I	L	N	G	S	K	C	W	I	T	N	G	G	K	S	T	W	Y	T
Template Known Secondary structure								T	T																						T	S									B	T	T	B	S	S	S	G	G	G									T	T													T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		V	L	A	R	D	P	Q	P	K	D	P	K	K	A	F	T	L	W	W	V	D	S	S	K	P	G	I	K	I	N	.	P	L	H	K	I	G	W	H	M	L	S	T	C	E	V	Y	L	D	N	V	E	V	E	E	S	D	M	V	G	E	E	G	M	G	F	L	N	V	M	Y	N	F	E	M	E	R	L	I	N
Query Conservation																																.
Alig confidence											.																					.
Template Conservation											.
Template Sequence		V	M	A	V	T	D	P	D	K	.	G	A	N	G	I	S	A	F	M	V	H	K	D	D	E	G	F	T	V	G	P	K	E	R	K	L	G	I	K	G	S	P	T	T	E	L	Y	F	E	N	C	R	I	P	G	D	R	I	I	G	E	P	G	T	G	F	K	T	A	L	A	T	L	D	H	T	R	P	T	I
Template Known Secondary structure						S		G	G	G	.	G	G	G	G								T	T		T	T										S	S		T	T	S														G	G	G			S	S	T	T												T	T
Template Predicted Secondary structure											.
Template SS confidence
		177	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	R	S	T	G	F	A	E	C	A	F	E	D	A	A	R	Y	A	N	Q	R	I	A	F	G	K	P	I	G	H	N	Q	M	I	Q	E	K	L	A	L	M	A	I	K	I	D	N	M	R	N	M	V	L	K	V	A	W	Q	A	D	Q	H	Q	S	L	R	T	S	A	A	L	A	K	L	Y	C	A	R	T
Query Conservation
Alig confidence																																																																	.	.	.
Template Conservation																																																																	.	.	.
Template Sequence		G	A	Q	A	V	G	I	A	Q	G	A	L	D	A	A	I	A	Y	T	K	E	R	K	Q	F	G	R	P	V	S	D	N	Q	G	V	Q	F	M	L	A	D	M	A	M	K	I	E	A	A	R	L	M	V	Y	S	A	A	A	R	A	E	R	G	.	.	.	G	F	I	S	A	A	S	K	C	F	A	S	D	V
Template Known Secondary structure																										T	T			G	G	G	S																																.	.	.
Template Predicted Secondary structure																																																																	.	.	.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.				.	320	.	.	.	.	.	.	.	.	.	330	.	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	E	V	I	D	D	A	I	Q	I	M	G	G	L	G	Y	T	D	E	A	R	V	S	R	F	W	R	D	V	R	C	E	R	I	G	G	G	T	D	E	I	M	I	Y	V	A	G	R	Q	I	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	M	E	V	T	T	D	A	V	Q	L	F	G	G	Y	G	Y	T	Q	D	F	P	V	E	R	M	M	R	D	A	K	I	T	Q	I	Y	E	G	T	N	Q	I	Q	R	V	V	M	S	R	A	L	L	R
Template Known Secondary structure													T	G	G	G	G	G	S	T	T	S	S												T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions