Job Description P0A9U8 Confidence 100.00% Date Thu Jan 5 11:11:26 GMT 2012 Rank 5 Aligned Residues 374 % Identity 27% Template c3owaC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of acyl-coa dehydrogenase complexed with fad from2 bacillus anthracis Resolution 1.97 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	T	E	E	Q	E	L	L	L	A	S	I	R	E	L	I	T	T	N	F	P	E	E	Y	F	R	T	C	D	Q	N	G	T	Y	P	R	E	F	M	R	A	L	A	D	N	G	I	S	M	L	G	V	P	E	E	F	G	G	I	P	A	D	Y	V	T	Q	M	L	A	L	M	E	V	S	K	C	G	A	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	F	S	S	E	H	K	X	I	A	K	T	T	E	D	F	I	V	N	E	V	L	P	E	L	E	Y	L	E	Q	H	E	F	D	R	S	V	R	L	L	K	E	A	G	E	L	G	L	L	G	A	D	V	P	E	E	Y	G	G	I	G	L	D	K	V	S	S	A	L	I	A	E	K	F	S	R	A	G	G	F
Template Known Secondary structure		G																				T	G	G	G					T	T	T															T	T	T	T		T	T	S		G	G	G	T	S																G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure															.																																																			.	.
Query SS confidence															.																																																			.	.
Query Sequence		A	F	L	I	T	N	G	Q	C	I	H	S	M	.	R	R	F	G	S	A	E	Q	L	R	K	T	A	E	S	T	L	E	T	G	D	P	A	Y	A	L	A	L	T	E	P	G	A	G	S	D	N	N	S	A	T	T	T	Y	T	R	K	N	G	K	.	.	V	Y	I	N	G	Q	K	T	F	I	T	G	A	K
Query Conservation															.																																																			.	.
Alig confidence															.																																																			.	.
Template Conservation
Template Sequence		A	I	T	H	G	A	H	V	G	I	G	S	L	P	I	V	L	F	G	N	E	E	Q	K	K	K	Y	L	P	L	L	A	T	G	E	K	L	A	A	Y	A	L	T	E	P	G	S	G	S	D	A	L	G	A	K	T	T	A	R	L	N	A	E	G	T	H	Y	V	L	N	G	E	K	Q	W	I	T	N	S	A
Template Known Secondary structure										T	T	T	T																						T	S	S								B	T	T	B	S	S	S	G	G	G									T	T	S	S													T	T	T
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		E	Y	P	Y	M	L	V	L	A	R	D	P	Q	P	K	D	P	K	K	A	F	T	L	W	W	V	D	S	S	K	P	G	I	K	I	N	P	.	L	H	K	I	G	W	H	M	L	S	T	C	E	V	Y	L	D	N	V	E	V	E	E	S	D	M	V	G	E	E	G	M	G	F	L	N	V	M	Y	N	F	E
Query Conservation																																							.
Alig confidence															.	.	.	.	.																				.
Template Conservation															.	.	.	.	.
Template Sequence		F	A	D	V	F	I	V	Y	A	K	I	D	G	.	.	.	.	.	E	H	F	S	A	F	I	V	E	K	D	Y	A	G	V	S	T	S	P	E	E	K	K	X	G	I	K	C	S	S	T	R	T	L	I	L	E	D	A	L	V	P	K	E	N	L	L	G	E	I	G	K	G	H	I	I	A	F	N	I	L	N
Template Known Secondary structure		T		S									T	T	.	.	.	.	.	T									T	T	S	T	T										S	S		T	T	S														G	G	G			S		T	T
Template Predicted Secondary structure															.	.	.	.	.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.						.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	E	R	L	I	N	A	A	R	S	T	G	F	A	E	C	A	F	E	D	A	A	R	Y	A	N	Q	R	I	A	F	G	K	P	I	G	H	N	Q	M	I	Q	E	K	L	A	L	M	A	I	K	I	D	N	M	R	N	M	V	L	K	V	A	W	Q	A	D	Q	H	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	G	R	Y	K	L	G	V	G	T	V	G	S	A	K	R	A	V	E	I	S	A	Q	Y	A	N	Q	R	Q	Q	F	K	Q	P	I	A	R	F	P	L	I	Q	E	K	L	A	N	X	A	A	K	T	Y	A	A	E	S	S	V	Y	R	T	V	G	L	F	E	S	R	X	S	T	L	S	E	E	E	V	K	D
Template Known Secondary structure																																T	T			G	G	G	S																																	T	T
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
										309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	Q	S	L	R	T	S	A	A	L	A	K	L	Y	C	A	R	T	A	M	E	V	I	D	D	A	I	Q	I	M	G	G	L	G	Y	T	D	E	A	R	V	S	R	F	W	R	D	V	R	C	E	R	I	G	G	G	T	D	E	I	M	I	Y	V	A	G	R	Q	I	L	K	D	Y
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	K	A	V	A	A	S	I	A	E	Y	A	I	E	C	S	L	N	K	V	F	G	S	E	V	L	D	Y	T	V	D	E	G	V	Q	I	H	G	G	Y	G	F	X	A	E	Y	E	I	E	R	X	Y	R	D	S	R	I	N	R	I	F	E	G	T	N	E	I	N	R	L	I	V	P	G	T	F	L	R	K	A
Template Known Secondary structure		S									T	T																											G	G	G	G	G	S	T	T	S										G	G	G	G	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
		381	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	K
Template Known Secondary structure			T
Template Predicted Secondary structure
Template SS confidence
		424	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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