Job Description P0A9U8 Confidence 100.00% Date Thu Jan 5 11:11:26 GMT 2012 Rank 21 Aligned Residues 363 % Identity 22% Template c3eomD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:glutaryl-coa dehydrogenase; PDBTitle: 2.4 a crystal structure of native glutaryl-coa dehydrogenase from2 burkholderia pseudomallei Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	F	S	L	T	E	E	Q	E	L	L	L	A	S	I	R	E	L	I	T	T	N	F	P	E	E	Y	F	R	T	C	D	Q	N	G	T	Y	P	R	E	F	M	R	A	L	A	D	N	G	I	S	M	L	G	V	P	E	E	F	G	G	I	P	A	D	Y	V	T	Q	M	L	A	L	M	E	V	S	K	C
Query Conservation
Alig confidence																										.
Template Conservation																										.
Template Sequence		L	D	Q	Q	L	A	D	D	E	R	M	V	R	D	A	A	H	A	Y	A	Q	G	K	L	.	A	P	R	V	T	E	A	F	R	H	E	T	T	D	A	A	I	F	R	E	M	G	E	I	G	L	L	G	P	T	I	P	E	Q	Y	G	G	P	G	L	D	Y	V	S	Y	G	L	I	A	R	E	V	E	R	V
Template Known Secondary structure		G	G	G	G	S																			T	.											T				T									T	T		S	S	T	T	S		G	G	G	T	S
Template Predicted Secondary structure																										.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		G	A	P	A	F	L	I	T	N	G	Q	C	I	.	.	H	S	M	R	R	F	G	S	A	E	Q	L	R	K	T	A	E	S	T	L	E	T	G	D	P	A	Y	A	L	A	L	T	E	P	G	A	G	S	D	N	N	S	A	T	T	T	Y	T	R	K	N	G	K	V	Y	I	N	G	Q	K	T	F	I	T	G
Query Conservation															.	.
Alig confidence															.	.																																							.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.
Template Sequence		D	S	G	Y	R	S	M	M	S	V	Q	S	S	L	V	M	V	P	I	F	E	F	G	S	D	A	Q	K	E	K	Y	L	P	K	L	A	T	G	E	W	I	G	C	F	G	L	T	E	P	S	M	V	T	.	.	.	.	.	.	.	R	A	R	K	V	P	G	G	Y	S	L	S	G	S	K	M	W	I	T	N
Template Known Secondary structure															T	T								S															T	S	S														.	.	.	.	.	.	.						T	T													T
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.								.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		A	K	E	Y	P	Y	M	L	V	L	A	R	D	P	Q	P	K	D	P	K	K	A	F	T	L	W	W	V	D	S	S	K	P	G	I	K	I	N	.	P	L	H	K	I	G	W	H	M	L	S	T	C	E	V	Y	L	D	N	V	E	V	E	E	S	D	M	V	G	E	E	G	M	G	F	L	N	V	M	Y	N
Query Conservation																																								.
Alig confidence																				.	.	.																		.																														.
Template Conservation																				.	.	.																																																.
Template Sequence		S	P	I	A	D	V	F	V	V	W	A	K	L	D	D	G	R	D	.	.	.	E	I	R	G	F	I	L	E	K	G	C	K	G	L	S	A	P	A	I	H	G	K	V	G	L	R	A	S	I	T	G	E	I	V	L	D	E	A	F	V	P	E	E	N	I	L	P	.	H	V	K	G	L	R	G	P	F	T	C
Template Known Secondary structure		G	G	G		S														.	.	.									T	T		T	T										S	S		T	T	S														G	G	G	B		T	.	T			T	T
Template Predicted Secondary structure																				.	.	.																																																.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190				.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	M	E	R	L	I	N	A	A	R	S	T	G	F	A	E	C	A	F	E	D	A	A	R	Y	A	N	Q	R	I	A	F	G	K	P	I	G	H	N	Q	M	I	Q	E	K	L	A	L	M	A	I	K	I	D	N	M	R	N	M	V	L	K	V	A	W	Q	A	D	Q	H	Q	S	L	R	T	S	A	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	S	A	R	Y	G	I	A	W	G	A	L	G	A	A	E	S	C	W	H	I	A	R	Q	Y	V	L	D	R	K	Q	F	G	R	P	L	A	A	N	Q	L	I	Q	K	K	L	A	D	M	Q	T	E	I	T	L	G	L	Q	G	V	L	R	L	G	R	M	K	D	E	G	T	A	A	V	E	I	T	S	I
Template Known Secondary structure																																		T	T			G	G	G																																T				T
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	L	Y	C	A	R	T	A	M	E	V	I	D	D	A	I	Q	I	M	G	G	L	G	Y	T	D	E	A	R	V	S	R	F	W	R	D	V	R	C	E	R	I	G	G	G	T	D	E	I	M	I	Y	V	A	G	R	Q	I	L	K
Query Conservation
Alig confidence																										.	.	.
Template Conservation																										.	.	.
Template Sequence		M	K	R	N	S	C	G	K	A	L	D	I	A	R	L	A	R	D	M	L	G	G	N	D	.	.	.	E	F	G	V	A	R	H	L	V	N	L	E	V	V	N	T	Y	E	G	T	H	D	I	H	A	L	I	L	G	R	A	Q	T	G
Template Known Secondary structure																										.	.	.	T	T													T	T	S	S	S															S
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.				.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions