Phyre 2 alignment of P0A9U8 with c2yyjA

Job Description P0A9U8
Confidence 99.98% Date Thu Jan 5 11:11:26 GMT 2012

Rank 53 Aligned Residues 310

% Identity 14% Template c2yyjA_

PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:4-hydroxyphenylacetate-3-hydroxylase; PDBTitle: crystal structure of the oxygenase component (hpab) of 4-2 hydroxyphenylacetate 3-monooxygenase complexed with fad and 4-3 hydroxyphenylacetate

Resolution 1.66 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.								.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.
Query Sequence	D	Y	V	T	Q	M	L	A	L	M	E	V	S	K	C	G	A	P	A	F	L	I	T	N	G	Q	C	I	H	S	M	R	R	F	G	S	A	.	.	.	.	.	.	.	E	Q	L	R	K	T	A	E	S	T	L	E	T	G	D	P	A	Y	A	L	A	L	T	E	P	G	A	G	S	D	N	N	S	A	T	T
Query Conservation																																						.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.
Template Conservation
Template Sequence	D	L	K	R	R	G	Q	A	Y	K	L	W	A	D	Q	N	L	G	M	M	G	R	S	P	D	Y	L	N	A	V	V	M	A	Y	A	A	S	A	D	Y	F	G	E	F	A	E	N	V	R	N	Y	Y	R	Y	L	R	D	Q	D	L	A	T	T	H	A	L	T	N	P	Q	V	N	R	A	R	P	P	S	G	Q
Template Known Secondary structure																T	T	T						T													T	G	G	G	G	G	G	G															T											S	S		T	T	S		G	G	G	S
Template Predicted Secondary structure
Template SS confidence
	79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.

	139									140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																																																										.											.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																																																										.											.	.	.
Query Sequence	T	.	.	.	.	.	.	.	.	Y	T	R	K	N	G	K	V	Y	I	N	G	Q	K	T	F	I	T	G	A	K	E	Y	P	Y	M	L	V	L	A	R	D	P	Q	P	K	D	P	K	K	A	F	T	L	W	W	V	D	S	S	K	P	G	I	K	I	N	.	P	L	H	K	I	G	W	H	M	L	.	.	.
Query Conservation		.	.	.	.	.	.	.	.																																																										.											.	.	.
Alig confidence		.	.	.	.	.	.	.	.																			.																																							.											.	.	.
Template Conservation																												.
Template Sequence	P	D	P	Y	I	P	V	G	V	V	K	Q	T	E	K	G	I	V	V	R	G	A	R	M	T	A	T	.	F	P	L	A	D	E	V	L	I	F	P	S	T	L	L	Q	A	G	S	E	K	Y	A	L	A	F	A	L	P	T	S	T	P	G	L	H	F	V	C	R	E	A	L	V	G	G	D	S	P	F	D	H
Template Known Secondary structure	S	S	T	T	S	B								S	S													.				S	S								S	S	S				S	T	T	T								T	T		T	T													S		T	T	T
Template Predicted Secondary structure																												.
Template SS confidence
	159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

									207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure	.	.	.	.	.	.	.	.																	.	.
Query SS confidence	.	.	.	.	.	.	.	.																	.	.
Query Sequence	.	.	.	.	.	.	.	.	S	T	C	E	V	Y	L	D	N	V	E	V	E	E	S	D	.	.	M	V	G	E	E	G	M	G	F	L	N	V	M	Y	N	F	E	M	E	R	L	I	N	A	A	R	S	T	G	F	A	E	C	A	F	E	D	A	A	R	Y	A	N	Q	R	I	A	F	G	K	P	I	G	H
Query Conservation	.	.	.	.	.	.	.	.																	.	.
Alig confidence	.	.	.	.	.	.	.	.																	.	.																																				.	.	.
Template Conservation																																																														.	.	.
Template Sequence	P	L	S	S	R	V	E	E	M	D	C	L	V	I	F	D	D	V	L	V	P	W	E	R	V	F	I	L	G	N	V	E	L	C	N	N	A	Y	A	A	T	G	A	L	N	H	M	A	H	Q	V	V	A	L	K	T	A	K	T	E	A	.	.	.	F	L	G	V	A	A	L	M	A	E	G	I	G	A	D	V
Template Known Secondary structure	T	T	T	T	T																	G	G	G					S													T																				.	.	.												T	T	G	G	G
Template Predicted Secondary structure																																																														.	.	.
Template SS confidence
	238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.				.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

	277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.						310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.																																					.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.																																					.	.	.	.	.	.
Query Sequence	N	Q	M	I	Q	E	K	L	A	L	M	A	I	K	I	D	N	M	R	N	M	V	L	K	V	A	W	Q	A	D	Q	H	Q	.	.	.	.	.	S	L	R	T	S	A	A	L	A	K	L	Y	C	A	R	T	A	M	E	V	I	D	D	A	I	Q	I	M	G	G	L	G	Y	T	D	E	.	.	.	.	.	.
Query Conservation																																		.	.	.	.	.																																					.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.																																					.	.	.	.	.	.
Template Conservation
Template Sequence	Y	G	H	V	Q	E	K	I	A	E	I	I	V	Y	L	E	A	M	R	A	F	W	T	R	A	E	E	E	A	K	E	N	A	Y	G	L	L	V	P	D	R	G	A	L	D	G	A	R	N	L	Y	P	R	L	Y	P	R	I	R	E	I	L	E	Q	I	G	A	S	G	L	I	T	L	P	S	E	K	D	F	K
Template Known Secondary structure	S																											T					T	T	S																																G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
	315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.

	346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	A	R	V	S	R	F	W	R	D	V	R	C	E	R	I	G	G	G	T	D	E	I	M	I	Y	V	A	G	R	Q	I	L	K	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence	G	P	L	G	P	F	L	E	K	F	L	Q	G	A	A	L	E	A	K	E	R	V	A	L	F	R	L	A	W	D	M	T	L	S
Template Known Secondary structure	S	T	T								T			S	S	S																	T	S
Template Predicted Secondary structure
Template SS confidence
	395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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