Job Description P0A9U8 Confidence 100.00% Date Thu Jan 5 11:11:26 GMT 2012 Rank 29 Aligned Residues 369 % Identity 22% Template c2wbiB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase family member 11; PDBTitle: crystal structure of human acyl-coa dehydrogenase 11 Resolution 2.80 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.														.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	E	E	Q	E	L	L	L	A	S	I	R	E	L	I	T	T	N	F	P	E	E	Y	F	R	T	C	D	Q	N	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	P	R	E	F	M	R	A	L	A	D	N	G	I	S	M	L	G	V	P	E	E	F	G	G	I	P	A	D	Y	V	T	Q	M	L
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.													.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Template Conservation																					.																																																			.	.	.
Template Sequence		T	R	K	G	Q	E	V	L	I	K	V	K	H	F	M	K	Q	H	I	.	L	P	A	E	K	E	V	T	E	F	Y	V	Q	N	E	N	S	V	D	K	W	G	K	P	L	V	I	D	K	L	K	E	M	A	K	V	E	G	L	W	N	L	F	L	P	A	V	S	G	L	.	.	.	S	H	V	D	Y	A	L
Template Known Secondary structure																			T		.															T	T		S	S			S															T	T		S		T	T								.	.	.
Template Predicted Secondary structure																					.																																																			.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.				.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.				.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.																																		.
Query SS confidence																									.	.	.																																		.
Query Sequence		A	L	M	E	V	S	K	C	G	A	P	A	F	L	I	T	N	G	Q	C	I	H	S	.	.	.	M	R	R	F	G	S	A	E	Q	L	R	K	T	A	E	S	T	L	E	T	G	D	P	A	Y	A	L	A	L	T	E	P	G	.	A	G	S	D	N	N	S	A	T	T	T	Y	T	R	K	N	G	K	V	Y
Query Conservation																									.	.	.																																		.
Alig confidence																									.	.	.																																		.
Template Conservation
Template Sequence		I	A	E	E	T	G	K	C	F	F	A	P	D	V	F	N	C	Q	A	P	D	T	G	N	M	E	V	L	H	L	Y	G	S	E	E	Q	K	K	Q	W	L	E	P	L	L	Q	G	N	I	T	S	C	F	C	M	T	E	P	D	V	A	S	S	D	A	T	N	I	E	C	S	I	Q	R	D	E	D	S	Y	V
Template Known Secondary structure							T	T	S	T	T					T	T			T	T																				T							T	S	S									T	T	S		T	T	S	G	G	G									T	T
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.				.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																																		.										.	.	.
Query SS confidence																																																		.										.	.	.
Query Sequence		I	N	G	Q	K	T	F	I	T	G	A	K	E	Y	P	Y	M	L	V	L	A	R	D	P	Q	P	K	D	P	K	K	A	F	T	L	W	W	V	D	S	S	K	P	G	I	K	I	N	.	P	L	H	K	I	G	W	H	M	.	.	.	L	S	T	C	E	V	Y	L	D	N	V	E	V	E	E	S	D	M	V
Query Conservation																																																		.										.	.	.
Alig confidence																														.	.																			.										.	.	.
Template Conservation																														.	.
Template Sequence		I	N	G	K	K	W	W	S	S	G	A	G	N	P	K	C	K	I	A	I	V	L	G	R	T	Q	N	T	.	.	S	Q	H	S	M	I	L	V	P	M	N	T	P	G	V	K	I	I	R	P	L	S	V	F	G	Y	T	D	N	F	H	G	G	H	F	E	I	H	F	N	Q	V	R	V	P	A	T	N	L	I
Template Known Secondary structure											T	T	T	S	T	T														.	.										T	T	S	T	T									B	T	T	B			G	G	G															G	G	G	B
Template Predicted Secondary structure																														.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	E	G	M	G	F	L	N	V	M	Y	N	F	E	M	E	R	L	I	N	A	A	R	S	T	G	F	A	E	C	A	F	E	D	A	A	R	Y	A	N	Q	R	I	A	F	G	K	P	I	G	H	N	Q	M	I	Q	E	K	L	A	L	M	A	I	K	I	D	N	M	R	N	M	V	L	K	V	A	W	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	E	G	R	G	F	E	I	S	Q	G	R	L	G	P	G	R	I	H	H	C	M	R	T	V	G	L	A	E	R	A	L	Q	I	M	C	E	R	A	T	Q	R	I	A	F	K	K	K	L	Y	A	H	E	V	V	A	H	W	I	A	E	S	R	I	A	I	E	K	I	R	L	L	T	L	K	A	A	H	S
Template Known Secondary structure		S		T	T																																										T	T			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		305	.	.			.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		A	D	Q	.	.	H	Q	S	L	R	T	S	A	A	L	A	K	L	Y	C	A	R	T	A	M	E	V	I	D	D	A	I	Q	I	M	G	G	L	G	Y	T	D	E	A	R	V	S	R	F	W	R	D	V	R	C	E	R	I	G	G	G	T	D	E	I	M	I	Y	V	A	G	R	Q	I	L	K	D	Y
Query Conservation					.	.
Alig confidence					.	.
Template Conservation
Template Sequence		M	D	T	L	G	S	A	G	A	K	K	E	I	A	M	I	K	V	A	A	P	R	A	V	S	K	I	V	D	W	A	I	Q	V	C	G	G	A	G	V	S	Q	D	Y	P	L	A	N	M	Y	A	I	T	R	V	L	R	L	A	D	G	P	D	E	V	H	L	S	A	I	A	T	M	E	L	R	D	Q
Template Known Secondary structure										T																										T	G	G	G	G	G	S	T	T	S	S												T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions