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Job DescriptionP0A9U8
Confidence100.00%DateThu Jan 5 11:11:26 GMT 2012
Rank6Aligned Residues370
% Identity22%Templatec2ix5A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:acyl-coenzyme a oxidase 4, peroxisomal; PDBTitle: short chain specific acyl-coa oxidase from arabidopsis2 thaliana, acx4 in complex with acetoacetyl-coa
Resolution2.7 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  DFSLTEEQELLLASIRELITTNFPEEYFRTCDQNGTYPREFMRALADNGISMLGVPEEFGGIPADYVTQMLALMEVSKCG
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Template Sequence  NDLLTPEEQAIRKKVRECMEKEV. APIMTEYWEKAEFPFHITPKLGAMGVAGGSIK. GYGCPGLSITANAIATAEIARVD
Template Known Secondary structure  GGGS
T.T


GGGTTT
TTTT

.STT





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   52.......60.........70.... .....80.........90.........100...... ...110.........120.........
 
   82.......90.. .......100.........110.........120.........130.........140.........150.........
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Query Sequence  APAFLITNGQC. . IHSMRRFGSAEQLRKTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVYINGQKTFITGA
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Template Sequence  ASCSTFILVHSSLGMLTIALCGSEAQKEKYLPSLAQLNTVACWALTEPDNGSDASGLGTTATKVEGGWKINGQKRWIGNS
Template Known Secondary structure  TTS
TTSS


BTTBSS
GGG


TTTT
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   130.........140.........150.........160.........170.........180.........190.........200.........
 
   160.........170.........180.........190...... ...200.........210.........220.........230........
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Query Sequence  KEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKIN. PLHKIGWHMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNF
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Template Sequence  TFADLLIIFARNTTTNQ. . . . INGFIVKKDAPGLKATKIPNKIGLRMVQNGDILLQNVFVPDEDRLPGVNSF. QDTSKVL
Template Known Secondary structure  TT
STTTSS....TT
TT



SSSTTS
GGGB
TT
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   210.........220...... ...230.........240.........250.........260.........270....... ..280....
 
   239240.........250.........260.........270.........280.........290.........300.........310........
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Query Sequence  EMERLINAARSTGFAECAFEDAARYANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALA
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Template Sequence  AVSRVMVAWQPIGISMGIYDMCHRYLKERKQFGAPLAAFQLNQQKLVQMLGNVQAMFLMGWRLCKLYETGQMTPGQASLG
Template Known Secondary structure 
TTGGGSTT


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   285....290.........300.........310.........320.........330.........340.........350.........360....
 
   319320.........330.........340.........350.........360.........370........
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Query Sequence  KLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQILK
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Template Sequence  KAWISSKARETASLGRELLGGNGILADFLVAKAFCDLEPIYTYEGTYDINTLVTGREVTG
Template Known Secondary structure  TGGGGG
GGGSSSS
S
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   365....370.........380.........390.........400.........410.........420....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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