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Job DescriptionP0A9U8
Confidence100.00%DateThu Jan 5 11:11:26 GMT 2012
Rank7Aligned Residues378
% Identity29%Templatec2cx9C_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of acyl-coa dehydrogenase
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MDFSLTEEQELLLASIRELITTNFPEEYFRTCDQNGTYPREFMRALADNGISMLGVPEEFGGIPADYVTQMLALMEVSKC
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Template Sequence  LWFEEGAEERQVLGPFREFLKAEVAP. GAAERDRTGAFPWDLVRKLAEFGVFGALVPEAYGGAGLSTRLFARMVEAIAYY
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   3......10.........20........ .30.........40.........50.........60.........70.........80.
 
   81........90.. .......100.........110.........120.........130.........140.........150........
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Query Sequence  GAPAFLITNGQC. . IHSMRRFGSAEQLRKTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVYINGQKTFITG
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Template Sequence  DGALALTVASHNSLATGHILLAGSEAQKEAFLPKLASGEALGAWGLTEPGSGSDAAALKTKAEKVEGGWRLNGTKQFITQ
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   159160.........170.........180 .........190...... ...200.........210.........220.........230....
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Query Sequence  AKEYPYMLVLARDPQPKDPKKA. . . FTLWWVDSSKPGIKIN. PLHKIGWHMLSTCEVYLDNVEVEESDMVGEEGMGFLNV
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Template Sequence  GSVAGVYVVMARTDPPPSPERKHQGISAFAFFRPERGLKVGRKEEKLGLTASDTAQLILEDLFVPEEALLGERGKGFYDV
Template Known Secondary structure  SSS
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   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
   235....240.........250.........260.........270.........280.........290.........300.........310....
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Query Sequence  MYNFEMERLINAARSTGFAECAFEDAARYANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTS
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Template Sequence  LRVLDGGRIGIAAMAVGLGQAALDYALAYAKGREAFGRPIAEFEGVSFKLAEAATELEAARLLYLKAAELKDAGRPFTLE
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   242.......250.........260.........270.........280.........290.........300.........310.........320.
 
   315....320.........330.........340.........350.........360.........370.........
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Query Sequence  AALAKLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQILKD
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Template Sequence  AAQAKLFASEAAVKACDEAIQILGGYGYVKDYPVERYWRDARLTRIGEGTSEILKLVIARRLLEA
Template Known Secondary structure  TGGGGGSTTSTGGGTTTS
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   322.......330.........340.........350.........360.........370.........380......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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