Job Description P0A9U8 Confidence 100.00% Date Thu Jan 5 11:11:26 GMT 2012 Rank 18 Aligned Residues 370 % Identity 23% Template c1siqA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glutaryl-coa dehydrogenase; PDBTitle: the crystal structure and mechanism of human glutaryl-coa2 dehydrogenase Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	F	S	L	T	E	E	Q	E	L	L	L	A	S	I	R	E	L	I	T	T	N	F	P	E	E	Y	F	R	T	C	D	Q	N	G	T	Y	P	R	E	F	M	R	A	L	A	D	N	G	I	S	M	L	G	V	P	E	E	F	G	G	I	P	A	D	Y	V	T	Q	M	L	A	L	M	E	V	S	K	C
Query Conservation
Alig confidence																										.																																	.
Template Conservation																										.																																	.
Template Sequence		L	E	E	Q	L	T	T	D	E	I	L	I	R	D	T	F	R	T	Y	C	Q	E	R	L	.	M	P	R	I	L	L	A	N	R	N	E	V	F	H	R	E	I	I	S	E	M	G	E	L	G	V	L	G	P	T	I	K	.	G	Y	G	C	A	G	V	S	S	V	A	Y	G	L	L	A	R	E	L	E	R	V
Template Known Secondary structure		G	G	G	G	S																			T	.											T				T									T	T		S	S	T	T			.		T	T																		T	T
Template Predicted Secondary structure																										.																																	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.			.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure													.	.																																																				.	.
Query SS confidence													.	.																																																				.	.
Query Sequence		G	A	P	A	F	L	I	T	N	G	Q	.	.	C	I	H	S	M	R	R	F	G	S	A	E	Q	L	R	K	T	A	E	S	T	L	E	T	G	D	P	A	Y	A	L	A	L	T	E	P	G	A	G	S	D	N	N	S	A	T	T	T	Y	T	R	.	.	K	N	G	K	V	Y	I	N	G	Q	K	T	F	I
Query Conservation													.	.																																																				.	.
Alig confidence													.	.																																																				.	.
Template Conservation
Template Sequence		D	S	G	Y	R	S	A	M	S	V	Q	S	S	L	V	M	H	P	I	Y	A	Y	G	S	E	E	Q	R	Q	K	Y	L	P	Q	L	A	K	G	E	L	L	G	C	F	G	L	T	E	P	N	S	G	S	D	P	S	S	M	E	T	R	A	H	Y	N	S	S	N	K	S	Y	T	L	N	G	T	K	T	W	I
Template Known Secondary structure															T	T								S														T	T	S	S								B	T	T	B	S	S		G	G	G									T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		T	G	A	K	E	Y	P	Y	M	L	V	L	A	R	D	P	Q	P	K	D	P	K	K	A	F	T	L	W	W	V	D	S	S	K	P	G	I	K	I	N	.	P	L	H	K	I	G	W	H	M	L	S	T	C	E	V	Y	L	D	N	V	E	V	E	E	S	D	M	V	G	E	E	G	M	G	F	L	N	V	M
Query Conservation																																										.
Alig confidence																					.	.	.	.	.																	.																														.
Template Conservation																					.	.	.	.	.																																															.
Template Sequence		T	N	S	P	M	A	D	L	F	V	V	W	A	R	C	E	D	G	C	.	.	.	.	.	I	R	G	F	L	L	E	K	G	M	R	G	L	S	A	P	R	I	Q	G	K	F	S	L	R	A	S	A	T	G	M	I	I	M	D	G	V	E	V	P	E	E	N	V	L	P	.	G	A	S	S	L	G	G	P	F
Template Known Secondary structure			T	G	G	G		S									T	T	S		.	.	.	.	.								T	T		T	T					B					S	S	S	T	T	S														G	G	G	B		T	.	T			S	S
Template Predicted Secondary structure																					.	.	.	.	.																																															.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.						.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	N	F	E	M	E	R	L	I	N	A	A	R	S	T	G	F	A	E	C	A	F	E	D	A	A	R	Y	A	N	Q	R	I	A	F	G	K	P	I	G	H	N	Q	M	I	Q	E	K	L	A	L	M	A	I	K	I	D	N	M	R	N	M	V	L	K	V	A	W	Q	A	D	Q	H	Q	S	L	R	T	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	C	L	N	N	A	R	Y	G	I	A	W	G	V	L	G	A	S	E	F	C	L	H	T	A	R	Q	Y	A	L	D	R	M	Q	F	G	V	P	L	A	R	N	Q	L	I	Q	K	K	L	A	D	M	L	T	E	I	T	L	G	L	H	A	C	L	Q	L	G	R	L	K	D	Q	D	K	A	A	P	E	M	V
Template Known Secondary structure																																				T	T			G	G	G	S																														T	T
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	A	K	L	Y	C	A	R	T	A	M	E	V	I	D	D	A	I	Q	I	M	G	G	L	G	Y	T	D	E	A	R	V	S	R	F	W	R	D	V	R	C	E	R	I	G	G	G	T	D	E	I	M	I	Y	V	A	G	R	Q	I	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	L	K	R	N	N	C	G	K	A	L	D	I	A	R	Q	A	R	D	M	L	G	G	N	G	I	S	D	E	Y	H	V	I	R	H	A	M	N	L	E	A	V	N	T	Y	E	G	T	H	D	I	H	A	L	I	L	G	R	A	I	T	G
Template Known Secondary structure																							T	G	G	G	G	G	S	G	G	G	S												T	T	S	S	S															S
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions