Job Description P0A9U8 Confidence 100.00% Date Thu Jan 5 11:11:26 GMT 2012 Rank 3 Aligned Residues 376 % Identity 25% Template c1rx0B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase family member 8, PDBTitle: crystal structure of isobutyryl-coa dehydrogenase complexed2 with substrate/ligand. Resolution 1.77 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	F	S	L	T	E	E	Q	E	L	L	L	A	S	I	R	E	L	I	T	T	N	F	P	E	E	Y	F	R	T	C	D	Q	N	G	T	Y	P	R	E	F	M	R	A	L	A	D	N	G	I	S	M	L	G	V	P	E	E	F	G	G	I	P	A	D	Y	V	T	Q	M	L	A	L	M	E	V	S	K	C
Query Conservation
Alig confidence																												.
Template Conservation																												.
Template Sequence		P	S	M	G	L	N	E	E	Q	K	E	F	Q	K	V	A	F	D	F	A	A	R	E	M	A	P	.	N	M	A	E	W	D	Q	K	E	L	F	P	V	D	V	M	R	K	A	A	Q	L	G	F	G	G	V	Y	I	Q	T	D	V	G	G	S	G	L	S	R	L	D	T	S	V	I	F	E	A	L	A	T	G
Template Known Secondary structure		T	T	T	T																				T	T	T	.	T								T													T	T		S	S	T	T	S		G	G	G	T																		T	T
Template Predicted Secondary structure																												.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		G	A	P	A	F	L	I	T	N	G	Q	C	I	H	S	.	M	R	R	F	G	S	A	E	Q	L	R	K	T	A	E	S	T	L	E	T	G	D	P	A	Y	A	L	A	L	T	E	P	G	A	G	S	D	N	N	S	A	T	T	T	Y	T	R	K	N	G	K	V	Y	I	N	G	Q	K	T	F	I	T	G	A
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		C	T	S	T	T	A	Y	I	S	I	H	N	M	C	A	W	M	I	D	S	F	G	N	E	E	Q	R	H	K	F	C	P	P	L	C	T	M	E	K	F	A	S	Y	C	L	T	E	P	G	S	G	S	D	A	A	S	L	L	T	S	A	K	K	Q	G	D	H	Y	I	L	N	G	S	K	A	F	I	S	G	A
Template Known Secondary structure																							S														T	T	S	S								B	T	T	B	S	S	S	G	G	G									T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		K	E	Y	P	Y	M	L	V	L	A	R	D	P	Q	P	K	D	P	K	K	A	F	T	L	W	W	V	D	S	S	K	P	G	I	K	I	N	.	P	L	H	K	I	G	W	H	M	L	S	T	C	E	V	Y	L	D	N	V	E	V	E	E	S	D	M	V	G	E	E	G	M	G	F	L	N	V	M	Y	N	F
Query Conservation																																							.
Alig confidence																		.	.																				.
Template Conservation																		.	.
Template Sequence		G	E	S	D	I	Y	V	V	M	C	R	T	G	G	P	G	.	.	P	K	G	I	S	C	I	V	V	E	K	G	T	P	G	L	S	F	G	K	K	E	K	K	V	G	W	N	S	Q	P	T	R	A	V	I	F	E	D	C	A	V	P	V	A	N	R	I	G	S	E	G	Q	G	F	L	I	A	V	R	G	L
Template Known Secondary structure		T	T		S									S	S	S	S	.	.	G	G	G								T	T		T	T										S	S		T	T	S														G	G	G			S	S	T	T
Template Predicted Secondary structure																		.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		E	M	E	R	L	I	N	A	A	R	S	T	G	F	A	E	C	A	F	E	D	A	A	R	Y	A	N	Q	R	I	A	F	G	K	P	I	G	H	N	Q	M	I	Q	E	K	L	A	L	M	A	I	K	I	D	N	M	R	N	M	V	L	K	V	A	W	Q	A	D	Q	H	.	Q	S	L	R	T	S	A	A	L
Query Conservation																																																																								.
Alig confidence																																																																								.
Template Conservation
Template Sequence		N	G	G	R	I	N	I	A	S	C	S	L	G	A	A	H	A	S	V	I	L	T	R	D	H	L	N	V	R	K	Q	F	G	E	P	L	A	S	N	Q	Y	L	Q	F	T	L	A	D	M	A	T	R	L	V	A	A	R	L	M	V	R	N	A	A	V	A	L	Q	E	E	R	K	D	A	V	A	L	C	S	M
Template Known Secondary structure																																	T	T			G	G	G																															T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	L	Y	C	A	R	T	A	M	E	V	I	D	D	A	I	Q	I	M	G	G	L	G	Y	T	D	E	A	R	V	S	R	F	W	R	D	V	R	C	E	R	I	G	G	G	T	D	E	I	M	I	Y	V	A	G	R	Q	I	L	K	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	L	F	A	T	D	E	C	F	A	I	C	N	Q	A	L	Q	M	H	G	G	Y	G	Y	L	K	D	Y	A	V	Q	Q	Y	V	R	D	S	R	V	H	Q	I	L	E	G	S	N	E	V	M	R	I	L	I	S	R	S	L	L	Q	E
Template Known Secondary structure																					T	G	G	G	G	G	S	T	T	S	T											T	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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