 |
Job Description | P37626 | Confidence | 76.89% | Date | Thu Jan 5 11:55:59 GMT 2012 |
Rank | 56 | Aligned Residues | 58 |
% Identity | 17% | Template | d2ix0a1 |
SCOP info | OB-fold
| Nucleic acid-binding proteins
| Cold shock DNA-binding domain-like
|
Resolution | 2.44 |
|
 |
  |   |
230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | |
|
. | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | |
|
|
. | . | . | 280 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|  |  |  | . | . |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
| . | . | . |
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | E | V | L | A | A | G | G | R | V | L | N | M | V | D | L | S | D | V | Y | M | T | F | F | L | P | T | E | Q | . |
. |
A | G | T | L | K | L | G | G | E | A | R | L | I | L | D | A | A | P | . |
. |
. |
D | L | R | I | P | A | T | I | S | F | V |
Query Conservation |   |
|   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |   | . | . |   |   |   |
|   |   |
|   |   |
|   |
|   |   |   |
|   |
| . | . | . |   |   |   |   |   |
|   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |
|
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|   |
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |
|   |
Template Sequence |   |
G | K | V | Q | G | K | N | D | R | L | A | I | V | P | D | H | P | L | L | K | D | A | I | P | C | R | A | A | R | G | L | N | H | E | F | K | E | G | D | W | A | V | A | E | M | R | R | H | P | L | K | G | D | R | S | F | Y | A | E | L | T | Q | Y |
Template Known Secondary structure |   |
 |  |  |  | S |
| S | S | S |  |  |  |  |  | S |
| T | T |
|
| S |
|  |  |  |  |  |
| T | T |
|
|
|
|
|
| T | T |
|  |  |  |  |  |  |  |  |
| G | G | G | T |
| S | S |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|