Job Description P37626 Confidence 29.21% Date Thu Jan 5 11:55:59 GMT 2012 Rank 139 Aligned Residues 78 % Identity 9% Template c3kygB_ PDB info PDB header:unknown function Chain: B: PDB Molecule:putative uncharacterized protein vca0042; PDBTitle: crystal structure of vca0042 (l135r) complexed with c-di-gmp Resolution 2.10 Å

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		249	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		Y	M	T	F	F	L	P	T	E	Q	A	G	T	.	L	K	L	G	G	E	A	R	L	I	L	D	A	A	P	D	L	R	I	P	A	T	I	S	F	V	A	S	V	A	Q	F	T	P	K	T	V	E	T	S	D	E	R	L	K	L	M	F	R	V	K	A	R	I	P	P	E	L	L	Q	Q	H	L	E	Y	V
Query Conservation															.
Alig confidence															.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	T	V	S	T	I	N	S	T	D	A	L	A	M	V	E	H	S	S	E	L	T	L	S	I	T	T	P	V	G	T	K	F	V	C	R	T	P	F	I	G	T	H	T	D	K	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	V	E	M	P	K	I	S	A	D	D	L	Q	Y	F	F
Template Known Secondary structure															T	S		T	T										T	T															T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.																	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	G	L	P	G	V	A	W	V	R	V	N	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	E	G	F	W	M	N	I	R	A	I	S	P	R	G
Template Known Secondary structure			T	T											S	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions