Return to main results Retrieve Phyre Job Id

Job DescriptionP75679
Confidence98.20%DateThu Jan 5 12:12:58 GMT 2012
Rank8Aligned Residues58
% Identity10%Templated6paxa1
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like Paired domain
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40.........50.........60........
Predicted Secondary structure 
























Query SS confidence 


























































Query Sequence  GVIMKKRNFSAEFKRESAQLVVDQNYTVADAASAMDVGLSTMTRWVKQLRDERQGKTPK
Query Conservation    




 

 


  

   

 
 
  


  



 


  


 
          
Alig confidence 




















.




































Template Conservation 
    




 


 


 
 .  
 
   




 

 






 

 




 

 
Template Sequence  GVFVNGRPLPDSTRQRIVELA. HSGARPCDISRILQVSNGCVSKILGRYYATGSIRPRA
Template Known Secondary structure 
TTS


.TT

T

S

S


Template Predicted Secondary structure 









.













Template SS confidence 


























































   10.........20.........30 .........40.........50.........60.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions