Return to main results Retrieve Phyre Job Id

Job DescriptionP75679
Confidence97.88%DateThu Jan 5 12:12:58 GMT 2012
Rank11Aligned Residues47
% Identity19%Templated1hlva1
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like Centromere-binding
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30..... ....40.........50.......
Predicted Secondary structure 











.



Query SS confidence 
























.





















Query Sequence  VIMKKRNFSAEFKRESAQLVVDQNY. TVADAASAMDVGLSTMTRWVKQ
Query Conservation   




 

 


  

   

 
 .
  


  



 


  


 
Alig confidence 
























.





















Template Conservation 
  


 


 

  

   
 
    
  


 


  


  



Template Sequence  MGPKRRQLTFREKSRIIQEVEENPDLRKGEIARRFNIPPSTLSTILKN
Template Known Secondary structure 


SS




TTS
T

T
Template Predicted Secondary structure 











Template SS confidence 















































   1........10.........20.........30.........40........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions