Return to main results Retrieve Phyre Job Id

Job DescriptionP75679
Confidence98.05%DateThu Jan 5 12:12:58 GMT 2012
Rank10Aligned Residues45
% Identity24%Templated1bw6a_
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like Centromere-binding
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30..... ....40.........50......
Predicted Secondary structure 











..



Query SS confidence 
























. .




















Query Sequence  VIMKKRNFSAEFKRESAQLVVDQNY. . TVADAASAMDVGLSTMTRWVK
Query Conservation   




 

 


  

   

 
 ..
  


  



 


  


Alig confidence 



















.



..




















Template Conservation   
 


 


 

  

  
.
 
 
  
 



  

  





 
Template Sequence  MGPKRRQLTFREKSRIIQEV. EENPDLRKGEIARRFNIPPSTLSTILK
Template Known Secondary structure 


SSS


.S
SSS
S

TT
Template Predicted Secondary structure 






.






Template SS confidence 















































   1........10.........20 .........30.........40.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions