Job Description P75679 Confidence 56.88% Date Thu Jan 5 12:12:58 GMT 2012 Rank 375 Aligned Residues 39 % Identity 15% Template c2vi6F_ PDB info PDB header:transcription Chain: F: PDB Molecule:homeobox protein nanog; PDBTitle: crystal structure of the nanog homeodomain Resolution 2.6 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.
Predicted Secondary structure																							.	.	.	.
Query SS confidence																							.	.	.	.
Query Sequence		R	N	F	S	A	E	F	K	R	E	S	A	Q	L	V	V	D	Q	N	Y	T	.	.	.	.	V	A	D	A	A	S	A	M	D	V	G	L	S	T	M	T	R	W
Query Conservation																							.	.	.	.
Alig confidence																							.	.	.	.
Template Conservation
Template Sequence		T	V	F	S	Q	A	Q	L	C	A	L	K	D	R	F	Q	K	Q	K	Y	L	S	L	Q	Q	M	Q	E	L	S	S	I	L	N	L	S	Y	K	Q	V	K	T	W
Template Known Secondary structure																				S															T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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