Job Description P75679 Confidence 97.60% Date Thu Jan 5 12:12:58 GMT 2012 Rank 13 Aligned Residues 103 % Identity 16% Template c2k27A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:paired box protein pax-8; PDBTitle: solution structure of human pax8 paired box domain Resolution UNK

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.						.	.	.	.	.	.	.		.	80	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.								.
Query SS confidence																																																																.	.	.	.	.								.
Query Sequence		G	V	I	M	K	K	R	N	F	S	A	E	F	K	R	E	S	A	Q	L	V	V	D	Q	N	Y	T	V	A	D	A	A	S	A	M	D	V	G	L	S	T	M	T	R	W	V	K	Q	L	R	D	E	R	Q	G	K	T	P	K	A	S	P	.	.	.	.	.	I	T	P	E	Q	I	E	.	I	R	E	L	R
Query Conservation																																																																.	.	.	.	.								.
Alig confidence																									.																																							.	.	.	.	.								.
Template Conservation																									.
Template Sequence		G	A	F	V	N	G	R	P	L	P	E	V	V	R	Q	R	I	V	D	L	A	H	Q	.	G	V	R	P	C	D	I	S	R	Q	L	R	V	S	H	G	C	V	S	K	I	L	G	R	Y	Y	E	T	G	S	I	R	P	G	V	I	G	G	S	K	P	K	V	A	T	P	K	V	V	E	K	I	G	D	Y	K
Template Known Secondary structure			T	T	S	S	S		S	S															.	T											T			S										S	S	T	T	S																	T	T
Template Predicted Secondary structure																									.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		84									.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.
Query Sequence		K	.	.	.	.	.	.	.	.	K	L	Q	R	I	E	M	E	N	E	I	L	K	K	A	T	V	D	S	I	G	Q	R	N	S	Y	V	K	T
Query Conservation			.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	Q	N	P	T	M	F	A	W	E	I	R	D	R	L	L	A	E	G	V	C	D	N	D	T	V	P	S	V	S	S	I	N	R	I	I	R	T
Template Known Secondary structure					S	S	S													T		S		T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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