Job Description P75679 Confidence 60.95% Date Thu Jan 5 12:12:58 GMT 2012 Rank 347 Aligned Residues 48 % Identity 10% Template c1hf0A_ PDB info PDB header:transcription factor Chain: A: PDB Molecule:octamer-binding transcription factor 1; PDBTitle: crystal structure of the dna-binding domain of oct-1 bound2 to dna as a dimer Resolution 2.7 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure																										.	.	.	.
Query SS confidence																										.	.	.	.
Query Sequence		M	K	K	R	N	F	S	A	E	F	K	R	E	S	A	Q	L	V	V	D	Q	N	Y	T	.	.	.	.	V	A	D	A	A	S	A	M	D	V	G	L	S	T	M	T	R	W	V	K	Q	L	R	D
Query Conservation																										.	.	.	.
Alig confidence																										.	.	.	.
Template Conservation
Template Sequence		K	K	R	T	S	I	E	T	N	I	R	V	A	L	E	K	S	F	L	E	N	Q	K	P	T	S	E	E	I	T	M	I	A	D	Q	L	N	M	E	K	E	V	I	R	V	W	F	S	N	R	R	Q
Template Known Secondary structure																							S	S														T
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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