Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAZ4
Confidence100.00%DateThu Jan 5 11:14:11 GMT 2012
Rank3Aligned Residues163
% Identity79%Templated3bgea1
SCOP infopost-AAA+ oligomerization domain-like post-AAA+ oligomerization domain-like MgsA/YrvN C-terminal domain-like
Resolution1.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   252.......260.........270.........280.........290.........300.........310.........320.........330.
Predicted Secondary structure 














Query SS confidence 















































































Query Sequence  GDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGER
Query Conservation 

 


 


  






 



  


 
  



  
 


   







 
 

  
     
    
 

   
Alig confidence 















































































Template Conservation 

 


 


  






 




 




  



  
 



  









 

  
 

  
   

 

   
Template Sequence  GDRFYDLISALHKSVRGSAPDAALYWYARILTAGGDPLYVARRLLAIASEDVGNADPRAMQVALAAWDCFTRVGAYEGER
Template Known Secondary structure 
TT
TT

TTGGG
TTT
Template Predicted Secondary structure 

















Template SS confidence 















































































   251........260.........270.........280.........290.........300.........310.........320.........330
 
   332.......340.........350.........360.........370.........380.........390.........400.........410.
Predicted Secondary structure 













































Query SS confidence 















































































Query Sequence  AIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIA
Query Conservation   

     

 




  
 
   
           

 


          
    
 
 
           


    
Alig confidence 












































....................






.






Template Conservation   

 





 





 
 
   
   
       

 



 
....................     
 .


  
 
Template Sequence  AIAQAIIYLSVAPKSNAVYTAFNTAKQQAKDLPDYDVPPHLRNAP. . . . . . . . . . . . . . . . . . . . TNLAGEN. YFPPELK
Template Known Secondary structure  S



S





GGGSSS
....................






.SS
GGGT
Template Predicted Secondary structure 














....................






.






Template SS confidence 















































































   331........340.........350.........360.........370..... ....380.. .......
 
   412.......420.........430.....
Predicted Secondary structure 










Query SS confidence 























Query Sequence  QTRYYFPTNRGLEGKIGEKLAWLA
Query Conservation      
     
 
           
Alig confidence 























Template Conservation      
 
   
 
  
   
   
Template Sequence  DTQYYFPTNRGMEIQIKEKLERLR
Template Known Secondary structure  T






SSTT
Template Predicted Secondary structure 











Template SS confidence 























   411........420.........430....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions